Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB11FIP1Q6WKZ4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RAB11FIP1Q6WKZ4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.34■■□□□ 1.01
RAB11FIP1Q6WKZ4 AC007322.1-201ENST00000426983 750 ntBASIC21.34■■□□□ 1.01
RAB11FIP1Q6WKZ4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
RAB11FIP1Q6WKZ4 AC104771.1-201ENST00000603335 964 ntBASIC21.34■■□□□ 1.01
RAB11FIP1Q6WKZ4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.34■■□□□ 1.01
RAB11FIP1Q6WKZ4 AL109923.1-201ENST00000618799 583 ntBASIC21.34■■□□□ 1.01
RAB11FIP1Q6WKZ4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.34■■□□□ 1.01
RAB11FIP1Q6WKZ4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB11FIP1Q6WKZ4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAB11FIP1Q6WKZ4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
RAB11FIP1Q6WKZ4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RAB11FIP1Q6WKZ4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RAB11FIP1Q6WKZ4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAB11FIP1Q6WKZ4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAB11FIP1Q6WKZ4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.33■■□□□ 1.01
RAB11FIP1Q6WKZ4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAB11FIP1Q6WKZ4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.33■■□□□ 1.01
RAB11FIP1Q6WKZ4 NCF1B-203ENST00000435988 1254 ntBASIC21.33■■□□□ 1.01
RAB11FIP1Q6WKZ4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RAB11FIP1Q6WKZ4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
RAB11FIP1Q6WKZ4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
RAB11FIP1Q6WKZ4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.33■■□□□ 1
RAB11FIP1Q6WKZ4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.33■■□□□ 1
RAB11FIP1Q6WKZ4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
RAB11FIP1Q6WKZ4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.32■■□□□ 1
RAB11FIP1Q6WKZ4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RAB11FIP1Q6WKZ4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAB11FIP1Q6WKZ4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RAB11FIP1Q6WKZ4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.32■■□□□ 1
RAB11FIP1Q6WKZ4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.32■■□□□ 1
RAB11FIP1Q6WKZ4 SLC7A5P2-201ENST00000553010 536 ntBASIC21.32■■□□□ 1
RAB11FIP1Q6WKZ4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.32■■□□□ 1
RAB11FIP1Q6WKZ4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
RAB11FIP1Q6WKZ4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.32■■□□□ 1
RAB11FIP1Q6WKZ4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RAB11FIP1Q6WKZ4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.32■■□□□ 1
RAB11FIP1Q6WKZ4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAB11FIP1Q6WKZ4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RAB11FIP1Q6WKZ4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAB11FIP1Q6WKZ4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB11FIP1Q6WKZ4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.31■■□□□ 1
RAB11FIP1Q6WKZ4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB11FIP1Q6WKZ4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB11FIP1Q6WKZ4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RAB11FIP1Q6WKZ4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.31■■□□□ 1
RAB11FIP1Q6WKZ4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RAB11FIP1Q6WKZ4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB11FIP1Q6WKZ4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.31■■□□□ 1
RAB11FIP1Q6WKZ4 GPX1P1-201ENST00000388829 606 ntBASIC21.31■■□□□ 1
RAB11FIP1Q6WKZ4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.31■■□□□ 1
RAB11FIP1Q6WKZ4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RAB11FIP1Q6WKZ4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAB11FIP1Q6WKZ4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB11FIP1Q6WKZ4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAB11FIP1Q6WKZ4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAB11FIP1Q6WKZ4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.3■■□□□ 1
RAB11FIP1Q6WKZ4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAB11FIP1Q6WKZ4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.3■■□□□ 1
RAB11FIP1Q6WKZ4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.3■■□□□ 1
RAB11FIP1Q6WKZ4 AC005181.1-201ENST00000604782 1256 ntBASIC21.3■■□□□ 1
RAB11FIP1Q6WKZ4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAB11FIP1Q6WKZ4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.3■■□□□ 1
RAB11FIP1Q6WKZ4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAB11FIP1Q6WKZ4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.3■■□□□ 1
RAB11FIP1Q6WKZ4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.3■■□□□ 1
RAB11FIP1Q6WKZ4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RAB11FIP1Q6WKZ4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP1Q6WKZ4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP1Q6WKZ4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP1Q6WKZ4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP1Q6WKZ4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP1Q6WKZ4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP1Q6WKZ4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.29■■□□□ 1
RAB11FIP1Q6WKZ4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP1Q6WKZ4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.29■■□□□ 1
RAB11FIP1Q6WKZ4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP1Q6WKZ4 AC010536.3-201ENST00000620306 533 ntBASIC21.29■■□□□ 1
RAB11FIP1Q6WKZ4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.29■■□□□ 1
RAB11FIP1Q6WKZ4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP1Q6WKZ4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP1Q6WKZ4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
RAB11FIP1Q6WKZ4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP1Q6WKZ4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP1Q6WKZ4 AC080038.3-201ENST00000623346 1952 ntBASIC21.28■■□□□ 1
RAB11FIP1Q6WKZ4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.28■■□□□ 1
RAB11FIP1Q6WKZ4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP1Q6WKZ4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP1Q6WKZ4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RAB11FIP1Q6WKZ4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.28■■□□□ 1
RAB11FIP1Q6WKZ4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP1Q6WKZ4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP1Q6WKZ4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP1Q6WKZ4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.28■■□□□ 1
RAB11FIP1Q6WKZ4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP1Q6WKZ4 AL355802.2-201ENST00000402069 882 ntBASIC21.28■■□□□ 1
RAB11FIP1Q6WKZ4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.28■■□□□ 1
RAB11FIP1Q6WKZ4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP1Q6WKZ4 AL050303.2-201ENST00000619798 666 ntBASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms