Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
FOXR2Q6PJQ5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
FOXR2Q6PJQ5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
FOXR2Q6PJQ5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FOXR2Q6PJQ5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
FOXR2Q6PJQ5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.19■■□□□ 1.3
FOXR2Q6PJQ5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FOXR2Q6PJQ5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.19■■□□□ 1.3
FOXR2Q6PJQ5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
FOXR2Q6PJQ5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXR2Q6PJQ5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.18■■□□□ 1.3
FOXR2Q6PJQ5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.18■■□□□ 1.3
FOXR2Q6PJQ5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.18■■□□□ 1.3
FOXR2Q6PJQ5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.18■■□□□ 1.3
FOXR2Q6PJQ5 AF106564.1-201ENST00000607058 2553 ntBASIC23.18■■□□□ 1.3
FOXR2Q6PJQ5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.18■■□□□ 1.3
FOXR2Q6PJQ5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
FOXR2Q6PJQ5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.17■■□□□ 1.3
FOXR2Q6PJQ5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.17■■□□□ 1.3
FOXR2Q6PJQ5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.17■■□□□ 1.3
FOXR2Q6PJQ5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.17■■□□□ 1.3
FOXR2Q6PJQ5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.17■■□□□ 1.3
FOXR2Q6PJQ5 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOXR2Q6PJQ5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOXR2Q6PJQ5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOXR2Q6PJQ5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.16■■□□□ 1.3
FOXR2Q6PJQ5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.16■■□□□ 1.3
FOXR2Q6PJQ5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.16■■□□□ 1.3
FOXR2Q6PJQ5 AL139246.5-201ENST00000606645 996 ntBASIC23.16■■□□□ 1.3
FOXR2Q6PJQ5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.16■■□□□ 1.3
FOXR2Q6PJQ5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
FOXR2Q6PJQ5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.16■■□□□ 1.3
FOXR2Q6PJQ5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
FOXR2Q6PJQ5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.16■■□□□ 1.3
FOXR2Q6PJQ5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.16■■□□□ 1.3
FOXR2Q6PJQ5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOXR2Q6PJQ5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXR2Q6PJQ5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXR2Q6PJQ5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.15■■□□□ 1.3
FOXR2Q6PJQ5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.15■■□□□ 1.3
FOXR2Q6PJQ5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXR2Q6PJQ5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXR2Q6PJQ5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.15■■□□□ 1.3
FOXR2Q6PJQ5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.15■■□□□ 1.3
FOXR2Q6PJQ5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXR2Q6PJQ5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXR2Q6PJQ5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXR2Q6PJQ5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
FOXR2Q6PJQ5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.14■■□□□ 1.3
FOXR2Q6PJQ5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
FOXR2Q6PJQ5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
FOXR2Q6PJQ5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
FOXR2Q6PJQ5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
FOXR2Q6PJQ5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.14■■□□□ 1.29
FOXR2Q6PJQ5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.14■■□□□ 1.29
FOXR2Q6PJQ5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.14■■□□□ 1.29
FOXR2Q6PJQ5 TPRG1LP1-201ENST00000598702 760 ntBASIC23.14■■□□□ 1.29
FOXR2Q6PJQ5 AL354811.1-201ENST00000610286 706 ntBASIC23.14■■□□□ 1.29
FOXR2Q6PJQ5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
FOXR2Q6PJQ5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.14■■□□□ 1.29
FOXR2Q6PJQ5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
FOXR2Q6PJQ5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
FOXR2Q6PJQ5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.13■■□□□ 1.29
FOXR2Q6PJQ5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.13■■□□□ 1.29
FOXR2Q6PJQ5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
FOXR2Q6PJQ5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.13■■□□□ 1.29
FOXR2Q6PJQ5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
FOXR2Q6PJQ5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
FOXR2Q6PJQ5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
FOXR2Q6PJQ5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.13■■□□□ 1.29
FOXR2Q6PJQ5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.13■■□□□ 1.29
FOXR2Q6PJQ5 EEF1DP3-203ENST00000566025 782 ntBASIC23.13■■□□□ 1.29
FOXR2Q6PJQ5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.13■■□□□ 1.29
FOXR2Q6PJQ5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
FOXR2Q6PJQ5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
FOXR2Q6PJQ5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.13■■□□□ 1.29
FOXR2Q6PJQ5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
FOXR2Q6PJQ5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
FOXR2Q6PJQ5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
FOXR2Q6PJQ5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
FOXR2Q6PJQ5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
FOXR2Q6PJQ5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.12■■□□□ 1.29
FOXR2Q6PJQ5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.12■■□□□ 1.29
FOXR2Q6PJQ5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
FOXR2Q6PJQ5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
FOXR2Q6PJQ5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
FOXR2Q6PJQ5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
FOXR2Q6PJQ5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
FOXR2Q6PJQ5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
FOXR2Q6PJQ5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
FOXR2Q6PJQ5 AC053503.5-201ENST00000601508 636 ntBASIC23.11■■□□□ 1.29
FOXR2Q6PJQ5 AL358852.1-201ENST00000623174 1268 ntBASIC23.11■■□□□ 1.29
FOXR2Q6PJQ5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
FOXR2Q6PJQ5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
FOXR2Q6PJQ5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
FOXR2Q6PJQ5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
FOXR2Q6PJQ5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
FOXR2Q6PJQ5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
FOXR2Q6PJQ5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
FOXR2Q6PJQ5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms