Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 AP001330.3-201ENST00000520123 633 ntBASIC19.34■□□□□ 0.69
ZNF544Q6NX49 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 AL136967.2-201ENST00000623968 743 ntBASIC19.34■□□□□ 0.69
ZNF544Q6NX49 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF544Q6NX49 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF544Q6NX49 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
ZNF544Q6NX49 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF544Q6NX49 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
ZNF544Q6NX49 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF544Q6NX49 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.33■□□□□ 0.69
ZNF544Q6NX49 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF544Q6NX49 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF544Q6NX49 AC136469.2-201ENST00000623944 1028 ntBASIC19.33■□□□□ 0.68
ZNF544Q6NX49 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF544Q6NX49 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF544Q6NX49 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.33■□□□□ 0.68
ZNF544Q6NX49 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
ZNF544Q6NX49 AC087742.1-201ENST00000575880 1738 ntBASIC19.33■□□□□ 0.68
ZNF544Q6NX49 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF544Q6NX49 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF544Q6NX49 LINC01521-201ENST00000504184 1943 ntBASIC19.33■□□□□ 0.68
ZNF544Q6NX49 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF544Q6NX49 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
ZNF544Q6NX49 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF544Q6NX49 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 AF106564.1-201ENST00000607058 2553 ntBASIC19.32■□□□□ 0.68
ZNF544Q6NX49 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 AC027682.1-201ENST00000562846 899 ntBASIC19.32■□□□□ 0.68
ZNF544Q6NX49 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF544Q6NX49 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
ZNF544Q6NX49 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.31■□□□□ 0.68
ZNF544Q6NX49 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ZNF544Q6NX49 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ZNF544Q6NX49 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.31■□□□□ 0.68
ZNF544Q6NX49 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF544Q6NX49 AC080038.3-201ENST00000623346 1952 ntBASIC19.31■□□□□ 0.68
ZNF544Q6NX49 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
ZNF544Q6NX49 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF544Q6NX49 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF544Q6NX49 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ZNF544Q6NX49 RASA4CP-201ENST00000424092 1398 ntBASIC19.31■□□□□ 0.68
ZNF544Q6NX49 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ZNF544Q6NX49 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF544Q6NX49 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF544Q6NX49 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF544Q6NX49 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ZNF544Q6NX49 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
ZNF544Q6NX49 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF544Q6NX49 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF544Q6NX49 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
ZNF544Q6NX49 ZNRF2P3-201ENST00000424200 374 ntBASIC19.3■□□□□ 0.68
ZNF544Q6NX49 AC006455.2-201ENST00000429931 906 ntBASIC19.3■□□□□ 0.68
ZNF544Q6NX49 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.3■□□□□ 0.68
ZNF544Q6NX49 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ZNF544Q6NX49 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF544Q6NX49 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF544Q6NX49 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms