Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARFGEF3Q5TH69 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ARFGEF3Q5TH69 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
ARFGEF3Q5TH69 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ARFGEF3Q5TH69 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.04■□□□□ 0.48
ARFGEF3Q5TH69 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.04■□□□□ 0.48
ARFGEF3Q5TH69 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ARFGEF3Q5TH69 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.04■□□□□ 0.48
ARFGEF3Q5TH69 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ARFGEF3Q5TH69 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 AC010536.3-201ENST00000620306 533 ntBASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 AL355802.2-201ENST00000402069 882 ntBASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARFGEF3Q5TH69 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ARFGEF3Q5TH69 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.02■□□□□ 0.48
ARFGEF3Q5TH69 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARFGEF3Q5TH69 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
ARFGEF3Q5TH69 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.02■□□□□ 0.48
ARFGEF3Q5TH69 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARFGEF3Q5TH69 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARFGEF3Q5TH69 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.02■□□□□ 0.48
ARFGEF3Q5TH69 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.02■□□□□ 0.48
ARFGEF3Q5TH69 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ARFGEF3Q5TH69 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ARFGEF3Q5TH69 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARFGEF3Q5TH69 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARFGEF3Q5TH69 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.02■□□□□ 0.48
ARFGEF3Q5TH69 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ARFGEF3Q5TH69 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.02■□□□□ 0.47
ARFGEF3Q5TH69 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ARFGEF3Q5TH69 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ARFGEF3Q5TH69 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ARFGEF3Q5TH69 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 AC007322.1-201ENST00000426983 750 ntBASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 AC068338.2-201ENST00000563278 1430 ntBASIC18.01■□□□□ 0.47
ARFGEF3Q5TH69 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ARFGEF3Q5TH69 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ARFGEF3Q5TH69 AC026471.6-201ENST00000622954 1905 ntBASIC18■□□□□ 0.47
ARFGEF3Q5TH69 POU5F1P4-201ENST00000413175 1085 ntBASIC18■□□□□ 0.47
ARFGEF3Q5TH69 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18■□□□□ 0.47
ARFGEF3Q5TH69 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18■□□□□ 0.47
ARFGEF3Q5TH69 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
ARFGEF3Q5TH69 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18■□□□□ 0.47
ARFGEF3Q5TH69 AC003102.1-202ENST00000563394 1796 ntBASIC18■□□□□ 0.47
ARFGEF3Q5TH69 KRT16P2-201ENST00000414673 1423 ntBASIC18■□□□□ 0.47
ARFGEF3Q5TH69 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ARFGEF3Q5TH69 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ARFGEF3Q5TH69 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ARFGEF3Q5TH69 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18■□□□□ 0.47
ARFGEF3Q5TH69 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18■□□□□ 0.47
ARFGEF3Q5TH69 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18■□□□□ 0.47
ARFGEF3Q5TH69 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
ARFGEF3Q5TH69 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18■□□□□ 0.47
ARFGEF3Q5TH69 AC068473.5-201ENST00000616428 2072 ntBASIC18■□□□□ 0.47
ARFGEF3Q5TH69 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms