Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 MIR4466-201ENST00000606121 54 ntBASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRIF1Q5T3J3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRIF1Q5T3J3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRIF1Q5T3J3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRIF1Q5T3J3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
LRIF1Q5T3J3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRIF1Q5T3J3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRIF1Q5T3J3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRIF1Q5T3J3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.98■□□□□ 0.79
LRIF1Q5T3J3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.98■□□□□ 0.79
LRIF1Q5T3J3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.98■□□□□ 0.79
LRIF1Q5T3J3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.98■□□□□ 0.79
LRIF1Q5T3J3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
LRIF1Q5T3J3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
LRIF1Q5T3J3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRIF1Q5T3J3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.98■□□□□ 0.79
LRIF1Q5T3J3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRIF1Q5T3J3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRIF1Q5T3J3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.97■□□□□ 0.79
LRIF1Q5T3J3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRIF1Q5T3J3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRIF1Q5T3J3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
LRIF1Q5T3J3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.96■□□□□ 0.79
LRIF1Q5T3J3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.96■□□□□ 0.79
LRIF1Q5T3J3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.96■□□□□ 0.79
LRIF1Q5T3J3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRIF1Q5T3J3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.96■□□□□ 0.79
LRIF1Q5T3J3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.96■□□□□ 0.79
LRIF1Q5T3J3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
LRIF1Q5T3J3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRIF1Q5T3J3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRIF1Q5T3J3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.96■□□□□ 0.79
LRIF1Q5T3J3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRIF1Q5T3J3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRIF1Q5T3J3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.96■□□□□ 0.79
LRIF1Q5T3J3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRIF1Q5T3J3 FEM1AP1-201ENST00000431297 1995 ntBASIC19.95■□□□□ 0.78
LRIF1Q5T3J3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.95■□□□□ 0.78
LRIF1Q5T3J3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRIF1Q5T3J3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRIF1Q5T3J3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRIF1Q5T3J3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRIF1Q5T3J3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.95■□□□□ 0.78
LRIF1Q5T3J3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRIF1Q5T3J3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
LRIF1Q5T3J3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.95■□□□□ 0.78
LRIF1Q5T3J3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRIF1Q5T3J3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
LRIF1Q5T3J3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRIF1Q5T3J3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LRIF1Q5T3J3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRIF1Q5T3J3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRIF1Q5T3J3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRIF1Q5T3J3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.95■□□□□ 0.78
LRIF1Q5T3J3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRIF1Q5T3J3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
LRIF1Q5T3J3 PKD1P6-201ENST00000343738 4769 ntBASIC19.94■□□□□ 0.78
LRIF1Q5T3J3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms