Protein–RNA interactions for Protein: Q5T2R2

PDSS1, Decaprenyl-diphosphate synthase subunit 1, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDSS1Q5T2R2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDSS1Q5T2R2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDSS1Q5T2R2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PDSS1Q5T2R2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PDSS1Q5T2R2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PDSS1Q5T2R2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDSS1Q5T2R2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.21■□□□□ 0.67
PDSS1Q5T2R2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
PDSS1Q5T2R2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.2■□□□□ 0.66
PDSS1Q5T2R2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDSS1Q5T2R2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.2■□□□□ 0.66
PDSS1Q5T2R2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.2■□□□□ 0.66
PDSS1Q5T2R2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.2■□□□□ 0.66
PDSS1Q5T2R2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.2■□□□□ 0.66
PDSS1Q5T2R2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.2■□□□□ 0.66
PDSS1Q5T2R2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.2■□□□□ 0.66
PDSS1Q5T2R2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDSS1Q5T2R2 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.2■□□□□ 0.66
PDSS1Q5T2R2 GUSBP5-202ENST00000510805 1989 ntBASIC19.2■□□□□ 0.66
PDSS1Q5T2R2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.2■□□□□ 0.66
PDSS1Q5T2R2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDSS1Q5T2R2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.2■□□□□ 0.66
PDSS1Q5T2R2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDSS1Q5T2R2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PDSS1Q5T2R2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDSS1Q5T2R2 AP006587.3-201ENST00000525742 1516 ntBASIC19.2■□□□□ 0.66
PDSS1Q5T2R2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 DUX4L2-201ENST00000561772 1275 ntBASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 DUX4L6-201ENST00000626483 1275 ntBASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 DUX4L1-201ENST00000627662 1275 ntBASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 DUX4L8-201ENST00000629013 1275 ntBASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 DUX4L3-201ENST00000630187 1275 ntBASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 DUX4L7-201ENST00000630678 1275 ntBASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 DUX4L5-201ENST00000630834 1275 ntBASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 AC055733.4-201ENST00000638462 1354 ntBASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDSS1Q5T2R2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
PDSS1Q5T2R2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDSS1Q5T2R2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
PDSS1Q5T2R2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.18■□□□□ 0.66
PDSS1Q5T2R2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDSS1Q5T2R2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDSS1Q5T2R2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDSS1Q5T2R2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.18■□□□□ 0.66
PDSS1Q5T2R2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.18■□□□□ 0.66
PDSS1Q5T2R2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.18■□□□□ 0.66
PDSS1Q5T2R2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDSS1Q5T2R2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDSS1Q5T2R2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDSS1Q5T2R2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
PDSS1Q5T2R2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PDSS1Q5T2R2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDSS1Q5T2R2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDSS1Q5T2R2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDSS1Q5T2R2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PDSS1Q5T2R2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDSS1Q5T2R2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDSS1Q5T2R2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDSS1Q5T2R2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PDSS1Q5T2R2 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.17■□□□□ 0.66
PDSS1Q5T2R2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDSS1Q5T2R2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDSS1Q5T2R2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.17■□□□□ 0.66
PDSS1Q5T2R2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDSS1Q5T2R2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDSS1Q5T2R2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.17■□□□□ 0.66
PDSS1Q5T2R2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.17■□□□□ 0.66
PDSS1Q5T2R2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDSS1Q5T2R2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PDSS1Q5T2R2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDSS1Q5T2R2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDSS1Q5T2R2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.16■□□□□ 0.66
PDSS1Q5T2R2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
PDSS1Q5T2R2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.16■□□□□ 0.66
PDSS1Q5T2R2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PDSS1Q5T2R2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.16■□□□□ 0.66
PDSS1Q5T2R2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDSS1Q5T2R2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDSS1Q5T2R2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms