Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
VARS2Q5ST30 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
VARS2Q5ST30 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.54■■□□□ 1.2
VARS2Q5ST30 GUSBP6-202ENST00000438529 1198 ntBASIC22.54■■□□□ 1.2
VARS2Q5ST30 TSPY6P-201ENST00000448518 926 ntBASIC22.54■■□□□ 1.2
VARS2Q5ST30 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.54■■□□□ 1.2
VARS2Q5ST30 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
VARS2Q5ST30 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VARS2Q5ST30 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.53■■□□□ 1.2
VARS2Q5ST30 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
VARS2Q5ST30 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.53■■□□□ 1.2
VARS2Q5ST30 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VARS2Q5ST30 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.53■■□□□ 1.2
VARS2Q5ST30 POU5F1P4-201ENST00000413175 1085 ntBASIC22.53■■□□□ 1.2
VARS2Q5ST30 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
VARS2Q5ST30 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.53■■□□□ 1.2
VARS2Q5ST30 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.53■■□□□ 1.2
VARS2Q5ST30 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.53■■□□□ 1.2
VARS2Q5ST30 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VARS2Q5ST30 AC120498.10-201ENST00000621827 505 ntBASIC22.53■■□□□ 1.2
VARS2Q5ST30 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.53■■□□□ 1.2
VARS2Q5ST30 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.53■■□□□ 1.2
VARS2Q5ST30 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
VARS2Q5ST30 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.53■■□□□ 1.2
VARS2Q5ST30 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.53■■□□□ 1.2
VARS2Q5ST30 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
VARS2Q5ST30 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.52■■□□□ 1.2
VARS2Q5ST30 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
VARS2Q5ST30 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
VARS2Q5ST30 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VARS2Q5ST30 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VARS2Q5ST30 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.52■■□□□ 1.2
VARS2Q5ST30 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VARS2Q5ST30 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
VARS2Q5ST30 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
VARS2Q5ST30 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.19
VARS2Q5ST30 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
VARS2Q5ST30 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
VARS2Q5ST30 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
VARS2Q5ST30 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.51■■□□□ 1.19
VARS2Q5ST30 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
VARS2Q5ST30 AC142086.2-201ENST00000569753 217 ntBASIC22.51■■□□□ 1.19
VARS2Q5ST30 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
VARS2Q5ST30 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.51■■□□□ 1.19
VARS2Q5ST30 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.51■■□□□ 1.19
VARS2Q5ST30 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VARS2Q5ST30 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VARS2Q5ST30 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
VARS2Q5ST30 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
VARS2Q5ST30 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
VARS2Q5ST30 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.5■■□□□ 1.19
VARS2Q5ST30 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VARS2Q5ST30 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
VARS2Q5ST30 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.5■■□□□ 1.19
VARS2Q5ST30 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
VARS2Q5ST30 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VARS2Q5ST30 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
VARS2Q5ST30 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VARS2Q5ST30 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.49■■□□□ 1.19
VARS2Q5ST30 AC068338.2-201ENST00000563278 1430 ntBASIC22.49■■□□□ 1.19
VARS2Q5ST30 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
VARS2Q5ST30 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VARS2Q5ST30 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
VARS2Q5ST30 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
VARS2Q5ST30 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
VARS2Q5ST30 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
VARS2Q5ST30 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
VARS2Q5ST30 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.49■■□□□ 1.19
VARS2Q5ST30 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
VARS2Q5ST30 AF201337.1-201ENST00000520239 748 ntBASIC22.49■■□□□ 1.19
VARS2Q5ST30 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
VARS2Q5ST30 AC133552.2-202ENST00000575694 574 ntBASIC22.49■■□□□ 1.19
VARS2Q5ST30 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
VARS2Q5ST30 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VARS2Q5ST30 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
VARS2Q5ST30 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
VARS2Q5ST30 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.49■■□□□ 1.19
VARS2Q5ST30 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VARS2Q5ST30 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.49■■□□□ 1.19
VARS2Q5ST30 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.49■■□□□ 1.19
VARS2Q5ST30 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.48■■□□□ 1.19
VARS2Q5ST30 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.48■■□□□ 1.19
VARS2Q5ST30 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VARS2Q5ST30 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.48■■□□□ 1.19
VARS2Q5ST30 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.48■■□□□ 1.19
VARS2Q5ST30 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
VARS2Q5ST30 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
VARS2Q5ST30 AC007322.4-201ENST00000509611 723 ntBASIC22.48■■□□□ 1.19
VARS2Q5ST30 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.48■■□□□ 1.19
VARS2Q5ST30 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
VARS2Q5ST30 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.48■■□□□ 1.19
VARS2Q5ST30 AC105036.2-201ENST00000569468 176 ntBASIC22.48■■□□□ 1.19
VARS2Q5ST30 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VARS2Q5ST30 AC026471.6-201ENST00000622954 1905 ntBASIC22.48■■□□□ 1.19
VARS2Q5ST30 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
VARS2Q5ST30 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
VARS2Q5ST30 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.48■■□□□ 1.19
VARS2Q5ST30 KRT16P2-201ENST00000414673 1423 ntBASIC22.48■■□□□ 1.19
VARS2Q5ST30 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.48■■□□□ 1.19
VARS2Q5ST30 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms