Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SNAI3Q3KNW1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.39■□□□□ 0.54
SNAI3Q3KNW1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
SNAI3Q3KNW1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.39■□□□□ 0.53
SNAI3Q3KNW1 AC005224.4-201ENST00000583262 1652 ntBASIC18.39■□□□□ 0.53
SNAI3Q3KNW1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.39■□□□□ 0.53
SNAI3Q3KNW1 MIR638-201ENST00000385237 100 ntBASIC18.39■□□□□ 0.53
SNAI3Q3KNW1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.39■□□□□ 0.53
SNAI3Q3KNW1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.39■□□□□ 0.53
SNAI3Q3KNW1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.39■□□□□ 0.53
SNAI3Q3KNW1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
SNAI3Q3KNW1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNAI3Q3KNW1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.39■□□□□ 0.53
SNAI3Q3KNW1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SNAI3Q3KNW1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNAI3Q3KNW1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNAI3Q3KNW1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNAI3Q3KNW1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNAI3Q3KNW1 AC055733.4-201ENST00000638462 1354 ntBASIC18.39■□□□□ 0.53
SNAI3Q3KNW1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNAI3Q3KNW1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNAI3Q3KNW1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNAI3Q3KNW1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.38■□□□□ 0.53
SNAI3Q3KNW1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNAI3Q3KNW1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNAI3Q3KNW1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNAI3Q3KNW1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNAI3Q3KNW1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
SNAI3Q3KNW1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNAI3Q3KNW1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNAI3Q3KNW1 AC012414.1-201ENST00000556676 535 ntBASIC18.38■□□□□ 0.53
SNAI3Q3KNW1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNAI3Q3KNW1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
SNAI3Q3KNW1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNAI3Q3KNW1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNAI3Q3KNW1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNAI3Q3KNW1 AL024507.2-201ENST00000606070 2574 ntBASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.37■□□□□ 0.53
SNAI3Q3KNW1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 AC105265.2-201ENST00000467189 838 ntBASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI3Q3KNW1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAI3Q3KNW1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAI3Q3KNW1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.35■□□□□ 0.53
SNAI3Q3KNW1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SNAI3Q3KNW1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAI3Q3KNW1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAI3Q3KNW1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNAI3Q3KNW1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.35■□□□□ 0.53
SNAI3Q3KNW1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAI3Q3KNW1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNAI3Q3KNW1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SNAI3Q3KNW1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.35■□□□□ 0.53
SNAI3Q3KNW1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.35■□□□□ 0.53
SNAI3Q3KNW1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.35■□□□□ 0.53
SNAI3Q3KNW1 AL354811.1-201ENST00000610286 706 ntBASIC18.35■□□□□ 0.53
SNAI3Q3KNW1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNAI3Q3KNW1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAI3Q3KNW1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.35■□□□□ 0.53
SNAI3Q3KNW1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SNAI3Q3KNW1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms