Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.12■□□□□ 0.49
EFNB3Q15768 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EFNB3Q15768 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EFNB3Q15768 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.12■□□□□ 0.49
EFNB3Q15768 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EFNB3Q15768 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
EFNB3Q15768 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.12■□□□□ 0.49
EFNB3Q15768 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EFNB3Q15768 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EFNB3Q15768 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.11■□□□□ 0.49
EFNB3Q15768 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.11■□□□□ 0.49
EFNB3Q15768 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.11■□□□□ 0.49
EFNB3Q15768 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.11■□□□□ 0.49
EFNB3Q15768 AC231657.2-201ENST00000624556 255 ntBASIC18.11■□□□□ 0.49
EFNB3Q15768 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EFNB3Q15768 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EFNB3Q15768 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.11■□□□□ 0.49
EFNB3Q15768 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EFNB3Q15768 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.11■□□□□ 0.49
EFNB3Q15768 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
EFNB3Q15768 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EFNB3Q15768 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.11■□□□□ 0.49
EFNB3Q15768 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
EFNB3Q15768 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFNB3Q15768 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.1■□□□□ 0.49
EFNB3Q15768 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.1■□□□□ 0.49
EFNB3Q15768 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFNB3Q15768 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFNB3Q15768 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFNB3Q15768 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.1■□□□□ 0.49
EFNB3Q15768 DUX4L16-201ENST00000555130 1264 ntBASIC18.1■□□□□ 0.49
EFNB3Q15768 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
EFNB3Q15768 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
EFNB3Q15768 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EFNB3Q15768 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.1■□□□□ 0.49
EFNB3Q15768 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EFNB3Q15768 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
EFNB3Q15768 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EFNB3Q15768 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.09■□□□□ 0.49
EFNB3Q15768 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
EFNB3Q15768 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EFNB3Q15768 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EFNB3Q15768 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EFNB3Q15768 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
EFNB3Q15768 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.09■□□□□ 0.49
EFNB3Q15768 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EFNB3Q15768 AC006970.2-201ENST00000450065 779 ntBASIC18.09■□□□□ 0.49
EFNB3Q15768 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.09■□□□□ 0.49
EFNB3Q15768 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.09■□□□□ 0.49
EFNB3Q15768 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
EFNB3Q15768 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.09■□□□□ 0.49
EFNB3Q15768 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.09■□□□□ 0.49
EFNB3Q15768 AC008175.2-201ENST00000612840 297 ntBASIC18.09■□□□□ 0.49
EFNB3Q15768 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EFNB3Q15768 AC080038.3-201ENST00000623346 1952 ntBASIC18.09■□□□□ 0.49
EFNB3Q15768 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
EFNB3Q15768 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
EFNB3Q15768 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EFNB3Q15768 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
EFNB3Q15768 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.08■□□□□ 0.49
EFNB3Q15768 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
EFNB3Q15768 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
EFNB3Q15768 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
EFNB3Q15768 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
EFNB3Q15768 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
EFNB3Q15768 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.08■□□□□ 0.48
EFNB3Q15768 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
EFNB3Q15768 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.08■□□□□ 0.48
EFNB3Q15768 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.08■□□□□ 0.48
EFNB3Q15768 POU5F1P4-201ENST00000413175 1085 ntBASIC18.08■□□□□ 0.48
EFNB3Q15768 CROCCP5-201ENST00000436658 830 ntBASIC18.08■□□□□ 0.48
EFNB3Q15768 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.08■□□□□ 0.48
EFNB3Q15768 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.08■□□□□ 0.48
EFNB3Q15768 AC120498.10-201ENST00000621827 505 ntBASIC18.08■□□□□ 0.48
EFNB3Q15768 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
EFNB3Q15768 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
EFNB3Q15768 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
EFNB3Q15768 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
EFNB3Q15768 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.07■□□□□ 0.48
EFNB3Q15768 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
EFNB3Q15768 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EFNB3Q15768 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.07■□□□□ 0.48
EFNB3Q15768 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.07■□□□□ 0.48
EFNB3Q15768 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
EFNB3Q15768 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.07■□□□□ 0.48
EFNB3Q15768 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EFNB3Q15768 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
EFNB3Q15768 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EFNB3Q15768 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EFNB3Q15768 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.07■□□□□ 0.48
EFNB3Q15768 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
EFNB3Q15768 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.07■□□□□ 0.48
EFNB3Q15768 AC010536.3-201ENST00000620306 533 ntBASIC18.07■□□□□ 0.48
EFNB3Q15768 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EFNB3Q15768 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
EFNB3Q15768 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EFNB3Q15768 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EFNB3Q15768 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EFNB3Q15768 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EFNB3Q15768 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms