Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 ITGB1BP1-215ENST00000484735 540 ntTSL 315.84■□□□□ 0.131e-5■■■□□ 17.8
SRSF1Q07955 DPH7-208ENST00000476303 922 ntTSL 1 (best)15.69■□□□□ 0.15e-7■■■□□ 17.8
SRSF1Q07955 DPH7-210ENST00000479650 1797 ntTSL 515.49■□□□□ 0.075e-7■■■□□ 17.8
SRSF1Q07955 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.31■□□□□ 0.041e-5■■■□□ 17.8
SRSF1Q07955 ITGB1BP1-209ENST00000464228 861 ntTSL 1 (best)15.26■□□□□ 0.031e-5■■■□□ 17.8
SRSF1Q07955 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.19■□□□□ 0.021e-5■■■□□ 17.8
SRSF1Q07955 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.19■□□□□ 0.021e-5■■■□□ 17.8
SRSF1Q07955 ITGB1BP1-208ENST00000463190 570 ntTSL 215.13■□□□□ 0.011e-5■■■□□ 17.8
SRSF1Q07955 DPH7-202ENST00000460572 394 ntTSL 514.99□□□□□ -0.015e-7■■■□□ 17.8
SRSF1Q07955 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.041e-5■■■□□ 17.8
SRSF1Q07955 ITGB1BP1-220ENST00000497031 560 ntTSL 314.75□□□□□ -0.051e-5■■■□□ 17.8
SRSF1Q07955 DPH7-206ENST00000472113 1414 ntTSL 514.75□□□□□ -0.055e-7■■■□□ 17.8
SRSF1Q07955 ATG4B-222ENST00000491867 435 ntTSL 514.62□□□□□ -0.071e-5■■■□□ 17.8
SRSF1Q07955 DPH7-212ENST00000485189 797 ntTSL 314.21□□□□□ -0.138e-8■■■□□ 17.8
SRSF1Q07955 DPH7-204ENST00000467768 750 ntTSL 514.12□□□□□ -0.155e-7■■■□□ 17.8
SRSF1Q07955 RAD9A-208ENST00000543808 822 ntTSL 514.02□□□□□ -0.179e-7■■■□□ 17.8
SRSF1Q07955 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.96□□□□□ -0.174e-13■■■□□ 17.8
SRSF1Q07955 ITGB1BP1-217ENST00000490426 1027 ntTSL 213.95□□□□□ -0.181e-5■■■□□ 17.8
SRSF1Q07955 DPH7-209ENST00000477690 1220 ntTSL 313.49□□□□□ -0.258e-8■■■□□ 17.8
SRSF1Q07955 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.291e-5■■■□□ 17.8
SRSF1Q07955 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.25□□□□□ -0.295e-7■■■□□ 17.8
SRSF1Q07955 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.311e-5■■■□□ 17.8
SRSF1Q07955 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.311e-5■■■□□ 17.8
SRSF1Q07955 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.341e-5■■■□□ 17.8
SRSF1Q07955 MRPS25-202ENST00000420267 590 ntTSL 412.6□□□□□ -0.394e-13■■■□□ 17.8
SRSF1Q07955 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.56□□□□□ -0.41e-5■■■□□ 17.8
SRSF1Q07955 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC12.44□□□□□ -0.424e-6■■■□□ 17.8
SRSF1Q07955 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.455e-7■■■□□ 17.8
SRSF1Q07955 ACSS3-206ENST00000549175 534 ntTSL 512.1□□□□□ -0.471e-5■■■□□ 17.8
SRSF1Q07955 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.511e-5■■■□□ 17.8
SRSF1Q07955 ITGB1BP1-214ENST00000483795 1913 ntTSL 211.84□□□□□ -0.511e-5■■■□□ 17.8
SRSF1Q07955 ITGB1BP1-221ENST00000497105 659 ntTSL 311.78□□□□□ -0.521e-5■■■□□ 17.8
SRSF1Q07955 RAD54L-210ENST00000488942 1121 ntTSL 311.51□□□□□ -0.579e-6■■■□□ 17.8
SRSF1Q07955 ABCC6-203ENST00000574094 2260 ntTSL 511.37□□□□□ -0.591e-5■■■□□ 17.8
SRSF1Q07955 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC11.36□□□□□ -0.591e-5■■■□□ 17.8
SRSF1Q07955 POLE-209ENST00000536445 2334 ntTSL 311.15□□□□□ -0.621e-5■■■□□ 17.8
SRSF1Q07955 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.681e-5■■■□□ 17.8
SRSF1Q07955 POLG-215ENST00000635986 2351 ntTSL 510.46□□□□□ -0.741e-5■■■□□ 17.8
SRSF1Q07955 DPH7-211ENST00000481839 798 ntTSL 310.3□□□□□ -0.765e-7■■■□□ 17.8
SRSF1Q07955 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.771e-5■■■□□ 17.8
SRSF1Q07955 LIG1-213ENST00000596672 792 ntTSL 310.15□□□□□ -0.781e-5■■■□□ 17.8
SRSF1Q07955 SAFB2-209ENST00000591123 836 ntTSL 510.06□□□□□ -0.82e-7■■■□□ 17.8
SRSF1Q07955 SAFB2-202ENST00000585449 443 ntTSL 510.03□□□□□ -0.86e-10■■■□□ 17.8
SRSF1Q07955 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.811e-5■■■□□ 17.8
SRSF1Q07955 HEXIM1-201ENST00000332499 3600 ntAPPRIS P1 BASIC9.64□□□□□ -0.871e-5■■■□□ 17.8
SRSF1Q07955 LIG1-210ENST00000596332 584 ntTSL 29.56□□□□□ -0.881e-5■■■□□ 17.8
SRSF1Q07955 RAD54L-203ENST00000459678 775 ntTSL 59.31□□□□□ -0.929e-6■■■□□ 17.8
SRSF1Q07955 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.941e-5■■■□□ 17.8
SRSF1Q07955 DZIP1-201ENST00000347108 7068 ntAPPRIS P4 TSL 5 BASIC9.16□□□□□ -0.941e-5■■■□□ 17.8
SRSF1Q07955 MRPS25-201ENST00000253686 4586 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.974e-13■■■□□ 17.8
SRSF1Q07955 CTNNBL1-210ENST00000628103 1958 ntTSL 2 BASIC8.99□□□□□ -0.971e-5■■■□□ 17.8
SRSF1Q07955 DPH7-205ENST00000470855 479 ntTSL 58.66□□□□□ -1.025e-7■■■□□ 17.8
SRSF1Q07955 DZIP1-202ENST00000361156 7011 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.031e-5■■■□□ 17.8
SRSF1Q07955 POLG-221ENST00000637238 3022 ntTSL 58.46□□□□□ -1.052e-6■■■□□ 17.8
SRSF1Q07955 DIP2A-202ENST00000417564 6967 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.075e-7■■■□□ 17.8
SRSF1Q07955 POLG-222ENST00000637264 3153 ntTSL 58.18□□□□□ -1.12e-6■■■□□ 17.8
SRSF1Q07955 MRPS25-205ENST00000449354 1119 ntTSL 2 BASIC8.05□□□□□ -1.124e-13■■■□□ 17.8
SRSF1Q07955 AC009120.2-203ENST00000565313 539 ntTSL 3 BASIC7.8□□□□□ -1.164e-6■■■□□ 17.8
SRSF1Q07955 POLG-218ENST00000636812 100 ntTSL 57.74□□□□□ -1.171e-5■■■□□ 17.8
SRSF1Q07955 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.181e-5■■■□□ 17.8
SRSF1Q07955 ADNP-204ENST00000396032 4581 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.191e-5■■■□□ 17.8
SRSF1Q07955 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.331e-5■■■□□ 17.8
SRSF1Q07955 ADNP-205ENST00000534467 773 ntTSL 36.02□□□□□ -1.451e-5■■■□□ 17.8
SRSF1Q07955 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.491e-5■■■□□ 17.8
SRSF1Q07955 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.623e-6■■■□□ 17.8
SRSF1Q07955 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.633e-6■■■□□ 17.8
SRSF1Q07955 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.81e-5■■■□□ 17.8
SRSF1Q07955 POLG-216ENST00000636530 100 ntTSL 52.23□□□□□ -2.051e-5■■■□□ 17.8
SRSF1Q07955 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.746e-6■■■□□ 17.7
SRSF1Q07955 PIGG-213ENST00000507493 768 ntTSL 317.76■□□□□ 0.436e-6■■■□□ 17.7
SRSF1Q07955 IRF9-215ENST00000561415 1769 ntTSL 216.68■□□□□ 0.266e-6■■■□□ 17.7
SRSF1Q07955 PMM1-209ENST00000493389 866 ntTSL 316.58■□□□□ 0.246e-6■■■□□ 17.7
SRSF1Q07955 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.29■□□□□ 0.26e-6■■■□□ 17.7
SRSF1Q07955 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.96■□□□□ 0.156e-6■■■□□ 17.7
SRSF1Q07955 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.96■□□□□ 0.156e-6■■■□□ 17.7
SRSF1Q07955 PIGG-224ENST00000513679 562 ntTSL 415.95■□□□□ 0.146e-6■■■□□ 17.7
SRSF1Q07955 PIGG-212ENST00000506898 832 ntTSL 315.31■□□□□ 0.046e-6■■■□□ 17.7
SRSF1Q07955 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.016e-6■■■□□ 17.7
SRSF1Q07955 PYCR2-202ENST00000446534 1341 ntTSL 214.19□□□□□ -0.146e-6■■■□□ 17.7
SRSF1Q07955 PMM1-205ENST00000472620 1576 ntTSL 513.25□□□□□ -0.296e-6■■■□□ 17.7
SRSF1Q07955 PMM1-202ENST00000414636 567 ntTSL 513.08□□□□□ -0.326e-6■■■□□ 17.7
SRSF1Q07955 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.46e-6■■■□□ 17.7
SRSF1Q07955 IRF9-213ENST00000561342 1066 ntTSL 512.54□□□□□ -0.46e-6■■■□□ 17.7
SRSF1Q07955 PMM1-204ENST00000466645 575 ntTSL 412.4□□□□□ -0.426e-6■■■□□ 17.7
SRSF1Q07955 PMM1-206ENST00000478337 823 ntTSL 212.2□□□□□ -0.466e-6■■■□□ 17.7
SRSF1Q07955 PMM1-208ENST00000485648 1405 ntTSL 512.19□□□□□ -0.466e-6■■■□□ 17.7
SRSF1Q07955 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.466e-6■■■□□ 17.7
SRSF1Q07955 IRF9-209ENST00000560365 623 ntTSL 211.77□□□□□ -0.536e-6■■■□□ 17.7
SRSF1Q07955 IRF9-212ENST00000561009 546 ntTSL 211.77□□□□□ -0.536e-6■■■□□ 17.7
SRSF1Q07955 PIGG-211ENST00000506402 2387 ntTSL 1 (best)11.69□□□□□ -0.546e-6■■■□□ 17.7
SRSF1Q07955 PYCR2-203ENST00000466127 506 ntTSL 211.57□□□□□ -0.566e-6■■■□□ 17.7
SRSF1Q07955 PYCR2-206ENST00000478402 3149 ntTSL 211.56□□□□□ -0.566e-6■■■□□ 17.7
SRSF1Q07955 IRF9-201ENST00000324076 658 ntTSL 511.33□□□□□ -0.66e-6■■■□□ 17.7
SRSF1Q07955 IRF9-205ENST00000559284 583 ntTSL 511.33□□□□□ -0.66e-6■■■□□ 17.7
SRSF1Q07955 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC10.97□□□□□ -0.656e-6■■■□□ 17.7
SRSF1Q07955 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC10.91□□□□□ -0.666e-6■■■□□ 17.7
SRSF1Q07955 IRF9-207ENST00000560275 841 ntTSL 510.84□□□□□ -0.676e-6■■■□□ 17.7
SRSF1Q07955 IRF9-211ENST00000560852 731 ntTSL 310.81□□□□□ -0.686e-6■■■□□ 17.7
SRSF1Q07955 PYCR2-207ENST00000489681 597 ntTSL 38.83□□□□□ -16e-6■■■□□ 17.7
SRSF1Q07955 DOCK5-203ENST00000444569 5335 ntTSL 56.97□□□□□ -1.296e-6■■■□□ 17.7
Retrieved 100 of 14,836 protein–RNA pairs in 131.5 ms