Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRKCDQ05655 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
PRKCDQ05655 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKCDQ05655 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKCDQ05655 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRKCDQ05655 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
PRKCDQ05655 AC007952.6-201ENST00000573168 2673 ntBASIC19.48■□□□□ 0.71
PRKCDQ05655 AC003957.1-201ENST00000625108 2673 ntBASIC19.48■□□□□ 0.71
PRKCDQ05655 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PRKCDQ05655 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRKCDQ05655 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PRKCDQ05655 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.47■□□□□ 0.71
PRKCDQ05655 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRKCDQ05655 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.47■□□□□ 0.71
PRKCDQ05655 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.47■□□□□ 0.71
PRKCDQ05655 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRKCDQ05655 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRKCDQ05655 MIR4466-201ENST00000606121 54 ntBASIC19.47■□□□□ 0.71
PRKCDQ05655 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.47■□□□□ 0.71
PRKCDQ05655 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRKCDQ05655 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
PRKCDQ05655 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PRKCDQ05655 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PRKCDQ05655 SYT6-210ENST00000641643 1587 ntBASIC19.47■□□□□ 0.71
PRKCDQ05655 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRKCDQ05655 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRKCDQ05655 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRKCDQ05655 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRKCDQ05655 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRKCDQ05655 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRKCDQ05655 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PRKCDQ05655 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCDQ05655 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCDQ05655 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCDQ05655 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PRKCDQ05655 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCDQ05655 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
PRKCDQ05655 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCDQ05655 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.46■□□□□ 0.71
PRKCDQ05655 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.46■□□□□ 0.71
PRKCDQ05655 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.46■□□□□ 0.71
PRKCDQ05655 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCDQ05655 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCDQ05655 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCDQ05655 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCDQ05655 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.46■□□□□ 0.71
PRKCDQ05655 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCDQ05655 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.46■□□□□ 0.71
PRKCDQ05655 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCDQ05655 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCDQ05655 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRKCDQ05655 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PRKCDQ05655 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
PRKCDQ05655 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKCDQ05655 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRKCDQ05655 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKCDQ05655 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRKCDQ05655 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.45■□□□□ 0.7
PRKCDQ05655 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKCDQ05655 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKCDQ05655 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRKCDQ05655 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.45■□□□□ 0.7
PRKCDQ05655 AC136469.2-201ENST00000623944 1028 ntBASIC19.45■□□□□ 0.7
PRKCDQ05655 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKCDQ05655 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRKCDQ05655 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRKCDQ05655 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PRKCDQ05655 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKCDQ05655 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
PRKCDQ05655 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKCDQ05655 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRKCDQ05655 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRKCDQ05655 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRKCDQ05655 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRKCDQ05655 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRKCDQ05655 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.44■□□□□ 0.7
PRKCDQ05655 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRKCDQ05655 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.44■□□□□ 0.7
PRKCDQ05655 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.44■□□□□ 0.7
PRKCDQ05655 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.44■□□□□ 0.7
PRKCDQ05655 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.44■□□□□ 0.7
PRKCDQ05655 AC011298.3-201ENST00000615796 283 ntBASIC19.44■□□□□ 0.7
PRKCDQ05655 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRKCDQ05655 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PRKCDQ05655 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PRKCDQ05655 FEM1AP4-201ENST00000443167 1987 ntBASIC19.44■□□□□ 0.7
PRKCDQ05655 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
PRKCDQ05655 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRKCDQ05655 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRKCDQ05655 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRKCDQ05655 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRKCDQ05655 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.43■□□□□ 0.7
PRKCDQ05655 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRKCDQ05655 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.43■□□□□ 0.7
PRKCDQ05655 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PRKCDQ05655 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRKCDQ05655 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRKCDQ05655 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRKCDQ05655 AP005435.1-201ENST00000529293 1178 ntBASIC19.43■□□□□ 0.7
PRKCDQ05655 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms