Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 YMR310CYMR310C 954 nt2.91□□□□□ -1.94
RKR1Q04781 snR17asnR17a 333 nt2.91□□□□□ -1.94
RKR1Q04781 YDR098C-BYDR098C-B 5268 nt2.91□□□□□ -1.94
RKR1Q04781 YDR210C-DYDR210C-D 5268 nt2.91□□□□□ -1.94
RKR1Q04781 YDR316W-BYDR316W-B 5268 nt2.91□□□□□ -1.94
RKR1Q04781 YDR365W-BYDR365W-B 5268 nt2.91□□□□□ -1.94
RKR1Q04781 YER138CYER138C 5268 nt2.91□□□□□ -1.94
RKR1Q04781 YER160CYER160C 5268 nt2.91□□□□□ -1.94
RKR1Q04781 YGR038C-BYGR038C-B 5268 nt2.91□□□□□ -1.94
RKR1Q04781 YGR161C-DYGR161C-D 5268 nt2.91□□□□□ -1.94
RKR1Q04781 YJR027WYJR027W 5268 nt2.91□□□□□ -1.94
RKR1Q04781 YLR157C-BYLR157C-B 5268 nt2.91□□□□□ -1.94
RKR1Q04781 YML039WYML039W 5268 nt2.91□□□□□ -1.94
RKR1Q04781 YML045WYML045W 5268 nt2.91□□□□□ -1.94
RKR1Q04781 YMR050CYMR050C 5268 nt2.91□□□□□ -1.94
RKR1Q04781 YOL103W-BYOL103W-B 5268 nt2.91□□□□□ -1.94
RKR1Q04781 YBR012W-BYBR012W-B 5271 nt2.91□□□□□ -1.94
RKR1Q04781 YOR142W-BYOR142W-B 5268 nt2.91□□□□□ -1.94
RKR1Q04781 YPL257W-BYPL257W-B 5268 nt2.91□□□□□ -1.94
RKR1Q04781 YPR158W-BYPR158W-B 5271 nt2.91□□□□□ -1.94
RKR1Q04781 TEC1YBR083W 1461 nt2.91□□□□□ -1.94
RKR1Q04781 DIT1YDR403W 1611 nt2.91□□□□□ -1.94
RKR1Q04781 YDR442WYDR442W 393 nt2.91□□□□□ -1.94
RKR1Q04781 YJR111CYJR111C 852 nt2.91□□□□□ -1.94
RKR1Q04781 RPC40YPR110C 1008 nt2.91□□□□□ -1.94
RKR1Q04781 KAP95YLR347C 2586 nt2.91□□□□□ -1.94
RKR1Q04781 RGA1YOR127W 3024 nt2.9□□□□□ -1.95
RKR1Q04781 LST7YGR057C 729 nt2.9□□□□□ -1.95
RKR1Q04781 YHR086W-AYHR086W-A 162 nt2.9□□□□□ -1.95
RKR1Q04781 YMR194C-AYMR194C-A 225 nt2.9□□□□□ -1.95
RKR1Q04781 ATP3YBR039W 936 nt2.9□□□□□ -1.95
RKR1Q04781 NAT1YDL040C 2565 nt2.9□□□□□ -1.95
RKR1Q04781 NUF2YOL069W 1356 nt2.9□□□□□ -1.95
RKR1Q04781 NFI1YOR156C 2181 nt2.89□□□□□ -1.95
RKR1Q04781 SQS1YNL224C 2304 nt2.89□□□□□ -1.95
RKR1Q04781 SEC16YPL085W 6588 nt2.89□□□□□ -1.95
RKR1Q04781 RPS16BYDL083C 432 nt2.88□□□□□ -1.95
RKR1Q04781 ELO3YLR372W 1038 nt2.88□□□□□ -1.95
RKR1Q04781 GIS1YDR096W 2685 nt2.88□□□□□ -1.95
RKR1Q04781 RFT1YBL020W 1725 nt2.88□□□□□ -1.95
RKR1Q04781 MIH1YMR036C 1665 nt2.88□□□□□ -1.95
RKR1Q04781 MGA2YIR033W 3342 nt2.88□□□□□ -1.95
RKR1Q04781 KOG1YHR186C 4674 nt2.88□□□□□ -1.95
RKR1Q04781 GIP4YAL031C 2283 nt2.88□□□□□ -1.95
RKR1Q04781 SPS22YCL048W 1392 nt2.87□□□□□ -1.95
RKR1Q04781 SWD2YKL018W 990 nt2.87□□□□□ -1.95
RKR1Q04781 BOS1YLR078C 735 nt2.87□□□□□ -1.95
RKR1Q04781 PAI3YMR174C 207 nt2.87□□□□□ -1.95
RKR1Q04781 SPS4YOR313C 1017 nt2.87□□□□□ -1.95
RKR1Q04781 TPD3YAL016W 1908 nt2.86□□□□□ -1.95
RKR1Q04781 LAA1YJL207C 6045 nt2.86□□□□□ -1.95
RKR1Q04781 SNX41YDR425W 1878 nt2.86□□□□□ -1.95
RKR1Q04781 YDL023CYDL023C 321 nt2.86□□□□□ -1.95
RKR1Q04781 ADK2YER170W 678 nt2.86□□□□□ -1.95
RKR1Q04781 RUF21RUF21 707 nt2.86□□□□□ -1.95
RKR1Q04781 SIP1YDR422C 2448 nt2.85□□□□□ -1.95
RKR1Q04781 YAL026C-AYAL026C-A 438 nt2.85□□□□□ -1.95
RKR1Q04781 YBL012CYBL012C 402 nt2.85□□□□□ -1.95
RKR1Q04781 SEN54YPL083C 1404 nt2.85□□□□□ -1.95
RKR1Q04781 MET6YER091C 2304 nt2.85□□□□□ -1.95
RKR1Q04781 MSH5YDL154W 2706 nt2.84□□□□□ -1.95
RKR1Q04781 SEG1YMR086W 2883 nt2.84□□□□□ -1.95
RKR1Q04781 YHR073W-AYHR073W-A 177 nt2.84□□□□□ -1.95
RKR1Q04781 POS5YPL188W 1245 nt2.84□□□□□ -1.95
RKR1Q04781 DOT6YER088C 2013 nt2.84□□□□□ -1.95
RKR1Q04781 ADK1YDR226W 669 nt2.83□□□□□ -1.96
RKR1Q04781 MAK21YDR060W 3078 nt2.83□□□□□ -1.96
RKR1Q04781 SPC72YAL047C 1869 nt2.83□□□□□ -1.96
RKR1Q04781 CAT8YMR280C 4302 nt2.83□□□□□ -1.96
RKR1Q04781 YIL046W-AYIL046W-A 165 nt2.83□□□□□ -1.96
RKR1Q04781 CUS1YMR240C 1311 nt2.82□□□□□ -1.96
RKR1Q04781 COA6YMR244C-A 315 nt2.82□□□□□ -1.96
RKR1Q04781 MMS1YPR164W 4224 nt2.82□□□□□ -1.96
RKR1Q04781 ECM5YMR176W 4236 nt2.81□□□□□ -1.96
RKR1Q04781 GLN4YOR168W 2430 nt2.81□□□□□ -1.96
RKR1Q04781 YDL041WYDL041W 354 nt2.81□□□□□ -1.96
RKR1Q04781 YIL024CYIL024C 570 nt2.81□□□□□ -1.96
RKR1Q04781 YLR326WYLR326W 723 nt2.81□□□□□ -1.96
RKR1Q04781 ORM2YLR350W 651 nt2.81□□□□□ -1.96
RKR1Q04781 OPT2YPR194C 2634 nt2.81□□□□□ -1.96
RKR1Q04781 CDC60YPL160W 3273 nt2.8□□□□□ -1.96
RKR1Q04781 SCH9YHR205W 2475 nt2.8□□□□□ -1.96
RKR1Q04781 JSN1YJR091C 3276 nt2.8□□□□□ -1.96
RKR1Q04781 SLH1YGR271W 5904 nt2.8□□□□□ -1.96
RKR1Q04781 SWC7YLR385C 399 nt2.8□□□□□ -1.96
RKR1Q04781 MEI5YPL121C 669 nt2.8□□□□□ -1.96
RKR1Q04781 FLO11YIR019C 4104 nt2.8□□□□□ -1.96
RKR1Q04781 ERT1YBR239C 1590 nt2.8□□□□□ -1.96
RKR1Q04781 YIR040CYIR040C 333 nt2.79□□□□□ -1.96
RKR1Q04781 FRM2YCL026C-A 582 nt2.79□□□□□ -1.96
RKR1Q04781 VPS34YLR240W 2628 nt2.79□□□□□ -1.96
RKR1Q04781 ALY1YKR021W 2748 nt2.79□□□□□ -1.96
RKR1Q04781 EXO84YBR102C 2262 nt2.79□□□□□ -1.96
RKR1Q04781 CAB2YIL083C 1098 nt2.78□□□□□ -1.96
RKR1Q04781 YOR392WYOR392W 444 nt2.78□□□□□ -1.96
RKR1Q04781 YBR103C-AYBR103C-A 144 nt2.78□□□□□ -1.96
RKR1Q04781 IRR1YIL026C 3453 nt2.78□□□□□ -1.96
RKR1Q04781 PEP7YDR323C 1548 nt2.78□□□□□ -1.96
RKR1Q04781 SHE4YOR035C 2370 nt2.78□□□□□ -1.96
RKR1Q04781 SAT4YCR008W 1812 nt2.78□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 16.8 ms