Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 STU1YBL034C 4542 nt3.45□□□□□ -1.86
RPA49Q01080 DPP1YDR284C 870 nt3.45□□□□□ -1.86
RPA49Q01080 YDR320W-BYDR320W-B 138 nt3.45□□□□□ -1.86
RPA49Q01080 YEL075CYEL075C 369 nt3.45□□□□□ -1.86
RPA49Q01080 YGL218WYGL218W 651 nt3.45□□□□□ -1.86
RPA49Q01080 CCE1YKL011C 1062 nt3.45□□□□□ -1.86
RPA49Q01080 RPL19BYBL027W 570 nt3.45□□□□□ -1.86
RPA49Q01080 PEX15YOL044W 1152 nt3.45□□□□□ -1.86
RPA49Q01080 YOR073W-AYOR073W-A 234 nt3.45□□□□□ -1.86
RPA49Q01080 YOR097CYOR097C 528 nt3.45□□□□□ -1.86
RPA49Q01080 RPA43YOR340C 981 nt3.45□□□□□ -1.86
RPA49Q01080 YPL088WYPL088W 1029 nt3.45□□□□□ -1.86
RPA49Q01080 ARO4YBR249C 1113 nt3.45□□□□□ -1.86
RPA49Q01080 HRD1YOL013C 1656 nt3.45□□□□□ -1.86
RPA49Q01080 ZDS2YML109W 2829 nt3.45□□□□□ -1.86
RPA49Q01080 ARG2YJL071W 1725 nt3.44□□□□□ -1.86
RPA49Q01080 YMR317WYMR317W 3423 nt3.44□□□□□ -1.86
RPA49Q01080 YDL157CYDL157C 357 nt3.44□□□□□ -1.86
RPA49Q01080 PET100YDR079W 336 nt3.44□□□□□ -1.86
RPA49Q01080 SPT2YER161C 1002 nt3.44□□□□□ -1.86
RPA49Q01080 RPL22BYFL034C-A 369 nt3.44□□□□□ -1.86
RPA49Q01080 COX23YHR116W 456 nt3.44□□□□□ -1.86
RPA49Q01080 DLT1YMR126C 1029 nt3.44□□□□□ -1.86
RPA49Q01080 MIC27YNL100W 705 nt3.44□□□□□ -1.86
RPA49Q01080 GIS2YNL255C 462 nt3.44□□□□□ -1.86
RPA49Q01080 MTR4YJL050W 3222 nt3.44□□□□□ -1.86
RPA49Q01080 ATP25YMR098C 1839 nt3.44□□□□□ -1.86
RPA49Q01080 DUN1YDL101C 1542 nt3.44□□□□□ -1.86
RPA49Q01080 VIP1YLR410W 3441 nt3.44□□□□□ -1.86
RPA49Q01080 SUC2YIL162W 1599 nt3.43□□□□□ -1.86
RPA49Q01080 MET10YFR030W 3108 nt3.43□□□□□ -1.86
RPA49Q01080 SLY41YOR307C 1362 nt3.43□□□□□ -1.86
RPA49Q01080 YDR149CYDR149C 708 nt3.43□□□□□ -1.86
RPA49Q01080 GRX2YDR513W 432 nt3.43□□□□□ -1.86
RPA49Q01080 SCM4YGR049W 564 nt3.43□□□□□ -1.86
RPA49Q01080 ERG25YGR060W 930 nt3.43□□□□□ -1.86
RPA49Q01080 LSM1YJL124C 519 nt3.43□□□□□ -1.86
RPA49Q01080 RFA3YJL173C 369 nt3.43□□□□□ -1.86
RPA49Q01080 YNL319WYNL319W 441 nt3.43□□□□□ -1.86
RPA49Q01080 HAT1YPL001W 1125 nt3.43□□□□□ -1.86
RPA49Q01080 SCD6YPR129W 1050 nt3.43□□□□□ -1.86
RPA49Q01080 RRP5YMR229C 5190 nt3.43□□□□□ -1.86
RPA49Q01080 PSP1YDR505C 2526 nt3.43□□□□□ -1.86
RPA49Q01080 GEP7YGL057C 864 nt3.42□□□□□ -1.86
RPA49Q01080 YGL242CYGL242C 546 nt3.42□□□□□ -1.86
RPA49Q01080 YHR182C-AYHR182C-A 474 nt3.42□□□□□ -1.86
RPA49Q01080 YLR366WYLR366W 306 nt3.42□□□□□ -1.86
RPA49Q01080 YLR416CYLR416C 399 nt3.42□□□□□ -1.86
RPA49Q01080 HHF1YBR009C 312 nt3.42□□□□□ -1.86
RPA49Q01080 POL30YBR088C 777 nt3.42□□□□□ -1.86
RPA49Q01080 VPS17YOR132W 1656 nt3.42□□□□□ -1.86
RPA49Q01080 NOP4YPL043W 2058 nt3.42□□□□□ -1.86
RPA49Q01080 STE23YLR389C 3084 nt3.41□□□□□ -1.86
RPA49Q01080 YLR352WYLR352W 2424 nt3.41□□□□□ -1.86
RPA49Q01080 DTD1YDL219W 453 nt3.41□□□□□ -1.86
RPA49Q01080 YDR193WYDR193W 399 nt3.41□□□□□ -1.86
RPA49Q01080 HTA1YDR225W 399 nt3.41□□□□□ -1.86
RPA49Q01080 YFR010W-AYFR010W-A 189 nt3.41□□□□□ -1.86
RPA49Q01080 YGL041W-AYGL041W-A 465 nt3.41□□□□□ -1.86
RPA49Q01080 SEC28YIL076W 891 nt3.41□□□□□ -1.86
RPA49Q01080 YLR169WYLR169W 354 nt3.41□□□□□ -1.86
RPA49Q01080 YOL019W-AYOL019W-A 153 nt3.41□□□□□ -1.86
RPA49Q01080 YOL106WYOL106W 354 nt3.41□□□□□ -1.86
RPA49Q01080 PEX11YOL147C 711 nt3.41□□□□□ -1.86
RPA49Q01080 YOR062CYOR062C 807 nt3.41□□□□□ -1.86
RPA49Q01080 REB1YBR049C 2433 nt3.41□□□□□ -1.86
RPA49Q01080 VTC4YJL012C 2166 nt3.41□□□□□ -1.86
RPA49Q01080 ETP1YHL010C 1758 nt3.4□□□□□ -1.86
RPA49Q01080 KRI1YNL308C 1776 nt3.4□□□□□ -1.86
RPA49Q01080 HSE1YHL002W 1359 nt3.4□□□□□ -1.86
RPA49Q01080 VPS9YML097C 1356 nt3.4□□□□□ -1.86
RPA49Q01080 AI4Q0065 1671 nt3.4□□□□□ -1.86
RPA49Q01080 YHR080CYHR080C 4038 nt3.4□□□□□ -1.86
RPA49Q01080 YDL176WYDL176W 2127 nt3.4□□□□□ -1.86
RPA49Q01080 YDR491CYDR491C 492 nt3.4□□□□□ -1.87
RPA49Q01080 YFR057WYFR057W 456 nt3.4□□□□□ -1.87
RPA49Q01080 YGL230CYGL230C 444 nt3.4□□□□□ -1.87
RPA49Q01080 RPS21AYKR057W 264 nt3.4□□□□□ -1.87
RPA49Q01080 YKR070WYKR070W 1059 nt3.4□□□□□ -1.87
RPA49Q01080 YAL066WYAL066W 309 nt3.4□□□□□ -1.87
RPA49Q01080 RNH203YLR154C 333 nt3.4□□□□□ -1.87
RPA49Q01080 YLR339CYLR339C 552 nt3.4□□□□□ -1.87
RPA49Q01080 YBL028CYBL028C 321 nt3.4□□□□□ -1.87
RPA49Q01080 YOR203WYOR203W 354 nt3.4□□□□□ -1.87
RPA49Q01080 YEL025CYEL025C 3567 nt3.4□□□□□ -1.87
RPA49Q01080 CIN8YEL061C 3003 nt3.4□□□□□ -1.87
RPA49Q01080 COM2YER130C 1332 nt3.4□□□□□ -1.87
RPA49Q01080 XRS2YDR369C 2565 nt3.4□□□□□ -1.87
RPA49Q01080 FAS1YKL182W 6156 nt3.4□□□□□ -1.87
RPA49Q01080 MIT1YEL007W 2001 nt3.39□□□□□ -1.87
RPA49Q01080 CHA4YLR098C 1947 nt3.39□□□□□ -1.87
RPA49Q01080 YCR100CYCR100C 951 nt3.39□□□□□ -1.87
RPA49Q01080 SRB7YDR308C 423 nt3.39□□□□□ -1.87
RPA49Q01080 SMT3YDR510W 306 nt3.39□□□□□ -1.87
RPA49Q01080 SVP26YHR181W 687 nt3.39□□□□□ -1.87
RPA49Q01080 ERG20YJL167W 1059 nt3.39□□□□□ -1.87
RPA49Q01080 YKL131WYKL131W 522 nt3.39□□□□□ -1.87
RPA49Q01080 OCA2YNL056W 594 nt3.39□□□□□ -1.87
RPA49Q01080 YNR062CYNR062C 984 nt3.39□□□□□ -1.87
RPA49Q01080 YPR077CYPR077C 372 nt3.39□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 19.1 ms