Protein–RNA interactions for Protein: Q00653

NFKB2, Nuclear factor NF-kappa-B p100 subunit, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB2Q00653 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21■□□□□ 0.95
NFKB2Q00653 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NFKB2Q00653 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NFKB2Q00653 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.99■□□□□ 0.95
NFKB2Q00653 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.99■□□□□ 0.95
NFKB2Q00653 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.99■□□□□ 0.95
NFKB2Q00653 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.99■□□□□ 0.95
NFKB2Q00653 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NFKB2Q00653 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NFKB2Q00653 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NFKB2Q00653 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NFKB2Q00653 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.99■□□□□ 0.95
NFKB2Q00653 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.99■□□□□ 0.95
NFKB2Q00653 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NFKB2Q00653 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.99■□□□□ 0.95
NFKB2Q00653 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NFKB2Q00653 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.99■□□□□ 0.95
NFKB2Q00653 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
NFKB2Q00653 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
NFKB2Q00653 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NFKB2Q00653 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.98■□□□□ 0.95
NFKB2Q00653 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NFKB2Q00653 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.98■□□□□ 0.95
NFKB2Q00653 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.98■□□□□ 0.95
NFKB2Q00653 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NFKB2Q00653 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NFKB2Q00653 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NFKB2Q00653 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NFKB2Q00653 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NFKB2Q00653 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.98■□□□□ 0.95
NFKB2Q00653 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NFKB2Q00653 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NFKB2Q00653 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NFKB2Q00653 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NFKB2Q00653 FEM1AP4-201ENST00000443167 1987 ntBASIC20.97■□□□□ 0.95
NFKB2Q00653 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.97■□□□□ 0.95
NFKB2Q00653 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NFKB2Q00653 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NFKB2Q00653 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NFKB2Q00653 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.97■□□□□ 0.95
NFKB2Q00653 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.97■□□□□ 0.95
NFKB2Q00653 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.97■□□□□ 0.95
NFKB2Q00653 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
NFKB2Q00653 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
NFKB2Q00653 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NFKB2Q00653 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB2Q00653 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.96■□□□□ 0.95
NFKB2Q00653 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB2Q00653 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB2Q00653 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB2Q00653 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB2Q00653 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB2Q00653 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.96■□□□□ 0.95
NFKB2Q00653 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.96■□□□□ 0.95
NFKB2Q00653 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.96■□□□□ 0.95
NFKB2Q00653 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.96■□□□□ 0.95
NFKB2Q00653 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB2Q00653 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB2Q00653 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.96■□□□□ 0.95
NFKB2Q00653 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB2Q00653 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB2Q00653 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NFKB2Q00653 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.95■□□□□ 0.94
NFKB2Q00653 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NFKB2Q00653 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.95■□□□□ 0.94
NFKB2Q00653 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NFKB2Q00653 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NFKB2Q00653 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.95■□□□□ 0.94
NFKB2Q00653 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NFKB2Q00653 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
NFKB2Q00653 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.95■□□□□ 0.94
NFKB2Q00653 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NFKB2Q00653 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.95■□□□□ 0.94
NFKB2Q00653 AL034346.1-201ENST00000568244 1277 ntBASIC20.95■□□□□ 0.94
NFKB2Q00653 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.95■□□□□ 0.94
NFKB2Q00653 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
NFKB2Q00653 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NFKB2Q00653 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NFKB2Q00653 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.95■□□□□ 0.94
NFKB2Q00653 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NFKB2Q00653 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.95■□□□□ 0.94
NFKB2Q00653 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.94■□□□□ 0.94
NFKB2Q00653 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NFKB2Q00653 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.94■□□□□ 0.94
NFKB2Q00653 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
NFKB2Q00653 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.94■□□□□ 0.94
NFKB2Q00653 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.94■□□□□ 0.94
NFKB2Q00653 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
NFKB2Q00653 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NFKB2Q00653 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NFKB2Q00653 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NFKB2Q00653 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NFKB2Q00653 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NFKB2Q00653 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NFKB2Q00653 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.93■□□□□ 0.94
NFKB2Q00653 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NFKB2Q00653 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NFKB2Q00653 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NFKB2Q00653 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.93■□□□□ 0.94
NFKB2Q00653 AP005435.1-201ENST00000529293 1178 ntBASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms