Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SEC61A1P61619 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SEC61A1P61619 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SEC61A1P61619 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.46■□□□□ 0.55
SEC61A1P61619 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A1P61619 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SEC61A1P61619 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.45■□□□□ 0.54
SEC61A1P61619 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A1P61619 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.45■□□□□ 0.54
SEC61A1P61619 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A1P61619 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.45■□□□□ 0.54
SEC61A1P61619 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A1P61619 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SEC61A1P61619 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.45■□□□□ 0.54
SEC61A1P61619 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.45■□□□□ 0.54
SEC61A1P61619 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A1P61619 AC010525.1-201ENST00000585559 441 ntBASIC18.45■□□□□ 0.54
SEC61A1P61619 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A1P61619 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A1P61619 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A1P61619 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SEC61A1P61619 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A1P61619 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
SEC61A1P61619 LINC01521-201ENST00000504184 1943 ntBASIC18.45■□□□□ 0.54
SEC61A1P61619 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A1P61619 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SEC61A1P61619 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SEC61A1P61619 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SEC61A1P61619 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SEC61A1P61619 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.44■□□□□ 0.54
SEC61A1P61619 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.44■□□□□ 0.54
SEC61A1P61619 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SEC61A1P61619 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SEC61A1P61619 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SEC61A1P61619 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.44■□□□□ 0.54
SEC61A1P61619 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SEC61A1P61619 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SEC61A1P61619 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SEC61A1P61619 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SEC61A1P61619 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SEC61A1P61619 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.43■□□□□ 0.54
SEC61A1P61619 AC126544.1-201ENST00000580842 1059 ntBASIC18.43■□□□□ 0.54
SEC61A1P61619 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.43■□□□□ 0.54
SEC61A1P61619 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SEC61A1P61619 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SEC61A1P61619 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.43■□□□□ 0.54
SEC61A1P61619 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SEC61A1P61619 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SEC61A1P61619 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SEC61A1P61619 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SEC61A1P61619 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A1P61619 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A1P61619 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A1P61619 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A1P61619 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.42■□□□□ 0.54
SEC61A1P61619 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A1P61619 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A1P61619 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A1P61619 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A1P61619 AC007952.6-201ENST00000573168 2673 ntBASIC18.42■□□□□ 0.54
SEC61A1P61619 AC003957.1-201ENST00000625108 2673 ntBASIC18.42■□□□□ 0.54
SEC61A1P61619 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.42■□□□□ 0.54
SEC61A1P61619 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A1P61619 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SEC61A1P61619 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61A1P61619 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
SEC61A1P61619 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SEC61A1P61619 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SEC61A1P61619 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SEC61A1P61619 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.41■□□□□ 0.54
SEC61A1P61619 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SEC61A1P61619 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SEC61A1P61619 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SEC61A1P61619 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SEC61A1P61619 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SEC61A1P61619 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SEC61A1P61619 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.41■□□□□ 0.54
SEC61A1P61619 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SEC61A1P61619 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A1P61619 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A1P61619 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A1P61619 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A1P61619 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A1P61619 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SEC61A1P61619 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.4■□□□□ 0.54
SEC61A1P61619 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A1P61619 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A1P61619 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SEC61A1P61619 AL157384.1-201ENST00000445995 2473 ntBASIC18.4■□□□□ 0.54
SEC61A1P61619 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A1P61619 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A1P61619 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.4■□□□□ 0.54
SEC61A1P61619 RARRES2P6-201ENST00000567333 442 ntBASIC18.4■□□□□ 0.54
SEC61A1P61619 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SEC61A1P61619 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.4■□□□□ 0.54
SEC61A1P61619 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A1P61619 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SEC61A1P61619 AC010542.4-201ENST00000563151 1910 ntBASIC18.4■□□□□ 0.54
SEC61A1P61619 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEC61A1P61619 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms