Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.87■■□□□ 1.09
EIF3EP60228 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.87■■□□□ 1.09
EIF3EP60228 AC106739.1-201ENST00000617035 715 ntBASIC21.87■■□□□ 1.09
EIF3EP60228 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.87■■□□□ 1.09
EIF3EP60228 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
EIF3EP60228 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EIF3EP60228 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EIF3EP60228 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
EIF3EP60228 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.86■■□□□ 1.09
EIF3EP60228 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
EIF3EP60228 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
EIF3EP60228 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
EIF3EP60228 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
EIF3EP60228 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.86■■□□□ 1.09
EIF3EP60228 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
EIF3EP60228 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
EIF3EP60228 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.86■■□□□ 1.09
EIF3EP60228 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.86■■□□□ 1.09
EIF3EP60228 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.86■■□□□ 1.09
EIF3EP60228 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
EIF3EP60228 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
EIF3EP60228 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
EIF3EP60228 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
EIF3EP60228 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
EIF3EP60228 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
EIF3EP60228 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.85■■□□□ 1.09
EIF3EP60228 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
EIF3EP60228 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
EIF3EP60228 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.85■■□□□ 1.09
EIF3EP60228 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
EIF3EP60228 AC027682.1-201ENST00000562846 899 ntBASIC21.85■■□□□ 1.09
EIF3EP60228 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.85■■□□□ 1.09
EIF3EP60228 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
EIF3EP60228 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
EIF3EP60228 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
EIF3EP60228 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
EIF3EP60228 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
EIF3EP60228 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EIF3EP60228 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
EIF3EP60228 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EIF3EP60228 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.84■■□□□ 1.09
EIF3EP60228 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EIF3EP60228 TSPY26P-201ENST00000476365 1326 ntBASIC21.84■■□□□ 1.09
EIF3EP60228 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
EIF3EP60228 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EIF3EP60228 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.84■■□□□ 1.09
EIF3EP60228 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.84■■□□□ 1.09
EIF3EP60228 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.84■■□□□ 1.09
EIF3EP60228 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.84■■□□□ 1.09
EIF3EP60228 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.84■■□□□ 1.09
EIF3EP60228 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.84■■□□□ 1.09
EIF3EP60228 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.84■■□□□ 1.09
EIF3EP60228 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EIF3EP60228 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
EIF3EP60228 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EIF3EP60228 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.84■■□□□ 1.09
EIF3EP60228 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
EIF3EP60228 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
EIF3EP60228 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.83■■□□□ 1.09
EIF3EP60228 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.83■■□□□ 1.09
EIF3EP60228 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.83■■□□□ 1.09
EIF3EP60228 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.83■■□□□ 1.09
EIF3EP60228 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
EIF3EP60228 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.83■■□□□ 1.09
EIF3EP60228 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.83■■□□□ 1.09
EIF3EP60228 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
EIF3EP60228 AP001330.3-201ENST00000520123 633 ntBASIC21.83■■□□□ 1.09
EIF3EP60228 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
EIF3EP60228 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.83■■□□□ 1.09
EIF3EP60228 AC110285.6-201ENST00000617652 491 ntBASIC21.83■■□□□ 1.09
EIF3EP60228 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
EIF3EP60228 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
EIF3EP60228 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
EIF3EP60228 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
EIF3EP60228 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
EIF3EP60228 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.82■■□□□ 1.08
EIF3EP60228 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.82■■□□□ 1.08
EIF3EP60228 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
EIF3EP60228 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.82■■□□□ 1.08
EIF3EP60228 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
EIF3EP60228 EDA-201ENST00000338901 1233 ntBASIC21.82■■□□□ 1.08
EIF3EP60228 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.82■■□□□ 1.08
EIF3EP60228 AC105233.4-201ENST00000642045 216 ntBASIC21.82■■□□□ 1.08
EIF3EP60228 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
EIF3EP60228 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.82■■□□□ 1.08
EIF3EP60228 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.82■■□□□ 1.08
EIF3EP60228 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.82■■□□□ 1.08
EIF3EP60228 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
EIF3EP60228 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.81■■□□□ 1.08
EIF3EP60228 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
EIF3EP60228 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
EIF3EP60228 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
EIF3EP60228 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
EIF3EP60228 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.81■■□□□ 1.08
EIF3EP60228 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.81■■□□□ 1.08
EIF3EP60228 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
EIF3EP60228 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
EIF3EP60228 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
EIF3EP60228 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
EIF3EP60228 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms