Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.51■□□□□ 0.71
SMIM11AP58511 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.51■□□□□ 0.71
SMIM11AP58511 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMIM11AP58511 AL049796.1-201ENST00000565336 1766 ntBASIC19.51■□□□□ 0.71
SMIM11AP58511 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMIM11AP58511 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMIM11AP58511 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SMIM11AP58511 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SMIM11AP58511 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMIM11AP58511 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMIM11AP58511 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMIM11AP58511 AP004607.7-201ENST00000527152 1677 ntBASIC19.5■□□□□ 0.71
SMIM11AP58511 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
SMIM11AP58511 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SMIM11AP58511 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.5■□□□□ 0.71
SMIM11AP58511 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.5■□□□□ 0.71
SMIM11AP58511 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.5■□□□□ 0.71
SMIM11AP58511 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.5■□□□□ 0.71
SMIM11AP58511 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SMIM11AP58511 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMIM11AP58511 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMIM11AP58511 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMIM11AP58511 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM11AP58511 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM11AP58511 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM11AP58511 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.49■□□□□ 0.71
SMIM11AP58511 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM11AP58511 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM11AP58511 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.49■□□□□ 0.71
SMIM11AP58511 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM11AP58511 AL138724.1-201ENST00000606771 1088 ntBASIC19.49■□□□□ 0.71
SMIM11AP58511 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM11AP58511 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM11AP58511 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM11AP58511 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.49■□□□□ 0.71
SMIM11AP58511 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM11AP58511 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM11AP58511 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMIM11AP58511 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.48■□□□□ 0.71
SMIM11AP58511 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.48■□□□□ 0.71
SMIM11AP58511 SLC25A24-204ENST00000569674 2357 ntBASIC19.48■□□□□ 0.71
SMIM11AP58511 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMIM11AP58511 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMIM11AP58511 AP005435.1-201ENST00000529293 1178 ntBASIC19.48■□□□□ 0.71
SMIM11AP58511 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.48■□□□□ 0.71
SMIM11AP58511 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMIM11AP58511 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.48■□□□□ 0.71
SMIM11AP58511 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMIM11AP58511 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SMIM11AP58511 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMIM11AP58511 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMIM11AP58511 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMIM11AP58511 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMIM11AP58511 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMIM11AP58511 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.48■□□□□ 0.71
SMIM11AP58511 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
SMIM11AP58511 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM11AP58511 AC003102.1-202ENST00000563394 1796 ntBASIC19.47■□□□□ 0.71
SMIM11AP58511 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM11AP58511 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.47■□□□□ 0.71
SMIM11AP58511 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM11AP58511 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM11AP58511 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM11AP58511 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.47■□□□□ 0.71
SMIM11AP58511 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
SMIM11AP58511 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
SMIM11AP58511 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM11AP58511 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.47■□□□□ 0.71
SMIM11AP58511 AC010525.1-201ENST00000585559 441 ntBASIC19.47■□□□□ 0.71
SMIM11AP58511 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM11AP58511 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM11AP58511 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM11AP58511 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
SMIM11AP58511 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.46■□□□□ 0.71
SMIM11AP58511 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM11AP58511 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM11AP58511 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.46■□□□□ 0.71
SMIM11AP58511 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM11AP58511 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM11AP58511 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SMIM11AP58511 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SMIM11AP58511 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM11AP58511 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM11AP58511 DUX4L19-201ENST00000557448 1267 ntBASIC19.46■□□□□ 0.71
SMIM11AP58511 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.46■□□□□ 0.71
SMIM11AP58511 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.46■□□□□ 0.71
SMIM11AP58511 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.46■□□□□ 0.71
SMIM11AP58511 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.46■□□□□ 0.71
SMIM11AP58511 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM11AP58511 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM11AP58511 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM11AP58511 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SMIM11AP58511 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM11AP58511 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SMIM11AP58511 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM11AP58511 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM11AP58511 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM11AP58511 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM11AP58511 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM11AP58511 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms