Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN2P57739 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21■□□□□ 0.95
CLDN2P57739 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN2P57739 TSPY6P-201ENST00000448518 926 ntBASIC21■□□□□ 0.95
CLDN2P57739 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21■□□□□ 0.95
CLDN2P57739 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN2P57739 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21■□□□□ 0.95
CLDN2P57739 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN2P57739 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN2P57739 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN2P57739 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN2P57739 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN2P57739 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN2P57739 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21■□□□□ 0.95
CLDN2P57739 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CLDN2P57739 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN2P57739 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.99■□□□□ 0.95
CLDN2P57739 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN2P57739 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN2P57739 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN2P57739 GUSBP6-202ENST00000438529 1198 ntBASIC20.99■□□□□ 0.95
CLDN2P57739 TERF1P5-201ENST00000477545 1207 ntBASIC20.99■□□□□ 0.95
CLDN2P57739 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN2P57739 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.99■□□□□ 0.95
CLDN2P57739 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CLDN2P57739 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN2P57739 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.99■□□□□ 0.95
CLDN2P57739 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CLDN2P57739 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CLDN2P57739 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN2P57739 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN2P57739 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CLDN2P57739 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.98■□□□□ 0.95
CLDN2P57739 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN2P57739 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.98■□□□□ 0.95
CLDN2P57739 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CLDN2P57739 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CLDN2P57739 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.98■□□□□ 0.95
CLDN2P57739 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.98■□□□□ 0.95
CLDN2P57739 SLC7A5P1-201ENST00000568957 537 ntBASIC20.98■□□□□ 0.95
CLDN2P57739 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.98■□□□□ 0.95
CLDN2P57739 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN2P57739 AC003102.1-202ENST00000563394 1796 ntBASIC20.97■□□□□ 0.95
CLDN2P57739 AC092053.2-201ENST00000640557 1818 ntBASIC20.97■□□□□ 0.95
CLDN2P57739 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.97■□□□□ 0.95
CLDN2P57739 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN2P57739 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN2P57739 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN2P57739 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CLDN2P57739 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
CLDN2P57739 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.97■□□□□ 0.95
CLDN2P57739 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.97■□□□□ 0.95
CLDN2P57739 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CLDN2P57739 AC008175.2-201ENST00000612840 297 ntBASIC20.97■□□□□ 0.95
CLDN2P57739 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CLDN2P57739 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN2P57739 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN2P57739 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN2P57739 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN2P57739 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN2P57739 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN2P57739 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
CLDN2P57739 AC026471.6-201ENST00000622954 1905 ntBASIC20.96■□□□□ 0.95
CLDN2P57739 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN2P57739 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN2P57739 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.96■□□□□ 0.95
CLDN2P57739 AL138781.1-201ENST00000566567 1274 ntBASIC20.96■□□□□ 0.95
CLDN2P57739 AC013268.1-206ENST00000638368 961 ntBASIC20.96■□□□□ 0.95
CLDN2P57739 AC112229.1-201ENST00000639295 961 ntBASIC20.96■□□□□ 0.95
CLDN2P57739 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CLDN2P57739 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.96■□□□□ 0.95
CLDN2P57739 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CLDN2P57739 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CLDN2P57739 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN2P57739 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN2P57739 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN2P57739 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN2P57739 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.95■□□□□ 0.94
CLDN2P57739 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN2P57739 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN2P57739 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CLDN2P57739 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.95■□□□□ 0.94
CLDN2P57739 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN2P57739 AC105036.2-201ENST00000569468 176 ntBASIC20.95■□□□□ 0.94
CLDN2P57739 AC142086.2-201ENST00000569753 217 ntBASIC20.95■□□□□ 0.94
CLDN2P57739 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN2P57739 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN2P57739 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CLDN2P57739 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.95■□□□□ 0.94
CLDN2P57739 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN2P57739 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN2P57739 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN2P57739 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN2P57739 AC127496.7-201ENST00000625110 1798 ntBASIC20.95■□□□□ 0.94
CLDN2P57739 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.94■□□□□ 0.94
CLDN2P57739 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CLDN2P57739 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN2P57739 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN2P57739 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.94■□□□□ 0.94
CLDN2P57739 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms