Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLDN20P56880 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.39■□□□□ 0.69
CLDN20P56880 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN20P56880 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CLDN20P56880 TERF1P2-201ENST00000583350 1212 ntBASIC19.39■□□□□ 0.69
CLDN20P56880 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN20P56880 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.39■□□□□ 0.69
CLDN20P56880 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN20P56880 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN20P56880 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CLDN20P56880 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN20P56880 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN20P56880 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN20P56880 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.38■□□□□ 0.69
CLDN20P56880 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN20P56880 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CLDN20P56880 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CLDN20P56880 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN20P56880 AC034268.1-201ENST00000441047 882 ntBASIC19.38■□□□□ 0.69
CLDN20P56880 AP004607.7-201ENST00000527152 1677 ntBASIC19.38■□□□□ 0.69
CLDN20P56880 KRT18P14-201ENST00000534205 1250 ntBASIC19.38■□□□□ 0.69
CLDN20P56880 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.38■□□□□ 0.69
CLDN20P56880 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN20P56880 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.38■□□□□ 0.69
CLDN20P56880 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN20P56880 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDN20P56880 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN20P56880 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDN20P56880 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN20P56880 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN20P56880 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CLDN20P56880 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN20P56880 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDN20P56880 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN20P56880 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CLDN20P56880 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN20P56880 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLDN20P56880 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CLDN20P56880 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN20P56880 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN20P56880 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN20P56880 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN20P56880 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLDN20P56880 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN20P56880 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN20P56880 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN20P56880 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN20P56880 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN20P56880 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CLDN20P56880 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN20P56880 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN20P56880 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN20P56880 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN20P56880 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN20P56880 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN20P56880 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.36■□□□□ 0.69
CLDN20P56880 AL162430.1-201ENST00000480705 870 ntBASIC19.36■□□□□ 0.69
CLDN20P56880 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN20P56880 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.36■□□□□ 0.69
CLDN20P56880 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.36■□□□□ 0.69
CLDN20P56880 AC092053.2-201ENST00000640557 1818 ntBASIC19.36■□□□□ 0.69
CLDN20P56880 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN20P56880 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN20P56880 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN20P56880 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN20P56880 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CLDN20P56880 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN20P56880 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CLDN20P56880 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.35■□□□□ 0.69
CLDN20P56880 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN20P56880 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN20P56880 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CLDN20P56880 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.35■□□□□ 0.69
CLDN20P56880 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN20P56880 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.35■□□□□ 0.69
CLDN20P56880 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CLDN20P56880 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN20P56880 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CLDN20P56880 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN20P56880 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN20P56880 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.35■□□□□ 0.69
CLDN20P56880 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN20P56880 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.35■□□□□ 0.69
CLDN20P56880 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN20P56880 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN20P56880 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN20P56880 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CLDN20P56880 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CLDN20P56880 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN20P56880 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN20P56880 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN20P56880 AC026310.3-201ENST00000625186 2373 ntBASIC19.34■□□□□ 0.69
CLDN20P56880 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.34■□□□□ 0.69
CLDN20P56880 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.34■□□□□ 0.69
CLDN20P56880 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.34■□□□□ 0.69
CLDN20P56880 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.34■□□□□ 0.69
CLDN20P56880 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CLDN20P56880 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.34■□□□□ 0.69
CLDN20P56880 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CLDN20P56880 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms