Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 PDR17YNL264C 1053 nt3.88□□□□□ -1.79
SUB1P54000 YNL276CYNL276C 396 nt3.88□□□□□ -1.79
SUB1P54000 RPL19AYBR084C-A 570 nt3.88□□□□□ -1.79
SUB1P54000 SWD3YBR175W 948 nt3.88□□□□□ -1.79
SUB1P54000 MTR4YJL050W 3222 nt3.88□□□□□ -1.79
SUB1P54000 YDR491CYDR491C 492 nt3.87□□□□□ -1.79
SUB1P54000 DAL2YIR029W 1032 nt3.87□□□□□ -1.79
SUB1P54000 ATG19YOL082W 1248 nt3.87□□□□□ -1.79
SUB1P54000 OSW1YOR255W 837 nt3.87□□□□□ -1.79
SUB1P54000 TYE7YOR344C 876 nt3.87□□□□□ -1.79
SUB1P54000 FDH1YOR388C 1131 nt3.87□□□□□ -1.79
SUB1P54000 FAR8YMR029C 1572 nt3.87□□□□□ -1.79
SUB1P54000 CMK1YFR014C 1341 nt3.87□□□□□ -1.79
SUB1P54000 YBR225WYBR225W 2703 nt3.86□□□□□ -1.79
SUB1P54000 DSE4YNR067C 3354 nt3.86□□□□□ -1.79
SUB1P54000 PDS5YMR076C 3834 nt3.86□□□□□ -1.79
SUB1P54000 IRC22YEL001C 678 nt3.86□□□□□ -1.79
SUB1P54000 YHL026CYHL026C 948 nt3.86□□□□□ -1.79
SUB1P54000 YKL131WYKL131W 522 nt3.86□□□□□ -1.79
SUB1P54000 MIC27YNL100W 705 nt3.86□□□□□ -1.79
SUB1P54000 YNL181WYNL181W 1224 nt3.86□□□□□ -1.79
SUB1P54000 UFE1YOR075W 1041 nt3.86□□□□□ -1.79
SUB1P54000 YKL100CYKL100C 1764 nt3.86□□□□□ -1.79
SUB1P54000 RIX1YHR197W 2292 nt3.86□□□□□ -1.79
SUB1P54000 URB2YJR041C 3525 nt3.86□□□□□ -1.79
SUB1P54000 DIT2YDR402C 1470 nt3.86□□□□□ -1.79
SUB1P54000 PUF6YDR496C 1971 nt3.85□□□□□ -1.79
SUB1P54000 CDC45YLR103C 1953 nt3.85□□□□□ -1.79
SUB1P54000 EPL1YFL024C 2499 nt3.85□□□□□ -1.79
SUB1P54000 FMN1YDR236C 657 nt3.85□□□□□ -1.79
SUB1P54000 YEL010WYEL010W 351 nt3.85□□□□□ -1.79
SUB1P54000 YER138W-AYER138W-A 105 nt3.85□□□□□ -1.79
SUB1P54000 FOL2YGR267C 732 nt3.85□□□□□ -1.79
SUB1P54000 ALB1YJL122W 528 nt3.85□□□□□ -1.79
SUB1P54000 YKL065W-AYKL065W-A 222 nt3.85□□□□□ -1.79
SUB1P54000 NDL1YLR254C 570 nt3.85□□□□□ -1.79
SUB1P54000 ECM15YBL001C 315 nt3.85□□□□□ -1.79
SUB1P54000 YNL203CYNL203C 612 nt3.85□□□□□ -1.79
SUB1P54000 YBL107W-AYBL107W-A 105 nt3.85□□□□□ -1.79
SUB1P54000 TIM12YBR091C 330 nt3.85□□□□□ -1.79
SUB1P54000 UBS1YBR165W 834 nt3.85□□□□□ -1.79
SUB1P54000 VHR2YER064C 1518 nt3.85□□□□□ -1.79
SUB1P54000 ALA1YOR335C 2877 nt3.84□□□□□ -1.79
SUB1P54000 MRPL11YDL202W 750 nt3.84□□□□□ -1.79
SUB1P54000 YFH7YFR007W 1062 nt3.84□□□□□ -1.79
SUB1P54000 YGR270C-AYGR270C-A 219 nt3.84□□□□□ -1.79
SUB1P54000 YIL171W-AYIL171W-A 453 nt3.84□□□□□ -1.79
SUB1P54000 YJL220WYJL220W 453 nt3.84□□□□□ -1.79
SUB1P54000 YAL056C-AYAL056C-A 351 nt3.84□□□□□ -1.79
SUB1P54000 VMA6YLR447C 1038 nt3.84□□□□□ -1.79
SUB1P54000 snR44snR44 211 nt3.84□□□□□ -1.79
SUB1P54000 YPD1YDL235C 504 nt3.83□□□□□ -1.8
SUB1P54000 YGR160WYGR160W 612 nt3.83□□□□□ -1.8
SUB1P54000 LSM8YJR022W 330 nt3.83□□□□□ -1.8
SUB1P54000 YKL070WYKL070W 510 nt3.83□□□□□ -1.8
SUB1P54000 RPL20AYMR242C 519 nt3.83□□□□□ -1.8
SUB1P54000 VAM3YOR106W 852 nt3.83□□□□□ -1.8
SUB1P54000 YPL135C-AYPL135C-A 174 nt3.83□□□□□ -1.8
SUB1P54000 MDM36YPR083W 1740 nt3.83□□□□□ -1.8
SUB1P54000 SKO1YNL167C 1944 nt3.83□□□□□ -1.8
SUB1P54000 SAF1YBR280C 1914 nt3.82□□□□□ -1.8
SUB1P54000 STN1YDR082W 1485 nt3.82□□□□□ -1.8
SUB1P54000 GWT1YJL091C 1473 nt3.82□□□□□ -1.8
SUB1P54000 VMA8YEL051W 771 nt3.82□□□□□ -1.8
SUB1P54000 YGL117WYGL117W 798 nt3.82□□□□□ -1.8
SUB1P54000 TRI1YMR233W 681 nt3.82□□□□□ -1.8
SUB1P54000 RFC3YNL290W 1023 nt3.82□□□□□ -1.8
SUB1P54000 YBR016WYBR016W 387 nt3.82□□□□□ -1.8
SUB1P54000 YDR034C-DYDR034C-D 5313 nt3.82□□□□□ -1.8
SUB1P54000 YBR259WYBR259W 2067 nt3.82□□□□□ -1.8
SUB1P54000 YCK2YNL154C 1641 nt3.81□□□□□ -1.8
SUB1P54000 ECO1YFR027W 846 nt3.81□□□□□ -1.8
SUB1P54000 DAD2YKR083C 402 nt3.81□□□□□ -1.8
SUB1P54000 REC102YLR329W 795 nt3.81□□□□□ -1.8
SUB1P54000 YLR364C-AYLR364C-A 123 nt3.81□□□□□ -1.8
SUB1P54000 YNL043CYNL043C 321 nt3.81□□□□□ -1.8
SUB1P54000 MRPL17YNL252C 846 nt3.81□□□□□ -1.8
SUB1P54000 DSC2YOL073C 969 nt3.81□□□□□ -1.8
SUB1P54000 YPR027CYPR027C 834 nt3.81□□□□□ -1.8
SUB1P54000 MUB1YMR100W 1863 nt3.81□□□□□ -1.8
SUB1P54000 ROD1YOR018W 2514 nt3.81□□□□□ -1.8
SUB1P54000 AVT2YEL064C 1443 nt3.8□□□□□ -1.8
SUB1P54000 YLR352WYLR352W 2424 nt3.8□□□□□ -1.8
SUB1P54000 MAK5YBR142W 2322 nt3.8□□□□□ -1.8
SUB1P54000 HIM1YDR317W 1245 nt3.8□□□□□ -1.8
SUB1P54000 YPR1YDR368W 939 nt3.8□□□□□ -1.8
SUB1P54000 YDR442WYDR442W 393 nt3.8□□□□□ -1.8
SUB1P54000 YFL065CYFL065C 309 nt3.8□□□□□ -1.8
SUB1P54000 COQ5YML110C 924 nt3.8□□□□□ -1.8
SUB1P54000 MRPS8YMR158W 468 nt3.8□□□□□ -1.8
SUB1P54000 INP1YMR204C 1263 nt3.8□□□□□ -1.8
SUB1P54000 INO4YOL108C 456 nt3.8□□□□□ -1.8
SUB1P54000 GCY1YOR120W 939 nt3.8□□□□□ -1.8
SUB1P54000 MET5YJR137C 4329 nt3.8□□□□□ -1.8
SUB1P54000 YDR061WYDR061W 1620 nt3.8□□□□□ -1.8
SUB1P54000 KHA1YJL094C 2622 nt3.79□□□□□ -1.8
SUB1P54000 TRM82YDR165W 1335 nt3.79□□□□□ -1.8
SUB1P54000 TRX3YCR083W 384 nt3.79□□□□□ -1.8
SUB1P54000 YDL228CYDL228C 642 nt3.79□□□□□ -1.8
SUB1P54000 NRG1YDR043C 696 nt3.79□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 18.3 ms