Protein–RNA interactions for Protein: P49954

NIT3, Omega-amidase NIT3, yeast

Predictions only

Length 291 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
NIT3	P49954	YJR037W	YJR037W	384 nt		4.24	□□□□□ -1.73
NIT3	P49954	SAP30	YMR263W	606 nt		4.24	□□□□□ -1.73
NIT3	P49954	MDG1	YNL173C	1101 nt		4.24	□□□□□ -1.73
NIT3	P49954	REI1	YBR267W	1182 nt		4.24	□□□□□ -1.73
NIT3	P49954	TRS85	YDR108W	2097 nt		4.24	□□□□□ -1.73
NIT3	P49954	HOS3	YPL116W	2094 nt		4.24	□□□□□ -1.73
NIT3	P49954	ALO1	YML086C	1581 nt		4.23	□□□□□ -1.73
NIT3	P49954	TSR1	YDL060W	2367 nt		4.23	□□□□□ -1.73
NIT3	P49954	MET32	YDR253C	576 nt		4.23	□□□□□ -1.73
NIT3	P49954	YER034W	YER034W	558 nt		4.23	□□□□□ -1.73
NIT3	P49954	YER175W-A	YER175W-A	165 nt		4.23	□□□□□ -1.73
NIT3	P49954	YGR228W	YGR228W	345 nt		4.23	□□□□□ -1.73
NIT3	P49954	IGO1	YNL157W	507 nt		4.23	□□□□□ -1.73
NIT3	P49954	PHO80	YOL001W	882 nt		4.23	□□□□□ -1.73
NIT3	P49954	TPO5	YKL174C	1857 nt		4.23	□□□□□ -1.73
NIT3	P49954	KIC1	YHR102W	3243 nt		4.23	□□□□□ -1.73
NIT3	P49954	HMG1	YML075C	3165 nt		4.22	□□□□□ -1.73
NIT3	P49954	BOP2	YLR267W	1713 nt		4.22	□□□□□ -1.73
NIT3	P49954	YDL032W	YDL032W	312 nt		4.22	□□□□□ -1.73
NIT3	P49954	YDL050C	YDL050C	372 nt		4.22	□□□□□ -1.73
NIT3	P49954	VMA8	YEL051W	771 nt		4.22	□□□□□ -1.73
NIT3	P49954	UPF3	YGR072W	1164 nt		4.22	□□□□□ -1.73
NIT3	P49954	YHL009W-A	YHL009W-A	1242 nt		4.22	□□□□□ -1.73
NIT3	P49954	VPS29	YHR012W	849 nt		4.22	□□□□□ -1.73
NIT3	P49954	SDH3	YKL141W	597 nt		4.22	□□□□□ -1.73
NIT3	P49954	BER1	YLR412W	825 nt		4.22	□□□□□ -1.73
NIT3	P49954	PBN1	YCL052C	1251 nt		4.22	□□□□□ -1.73
NIT3	P49954	YML096W	YML096W	1578 nt		4.22	□□□□□ -1.73
NIT3	P49954	SIN4	YNL236W	2925 nt		4.21	□□□□□ -1.74
NIT3	P49954	RPS18A	YDR450W	441 nt		4.21	□□□□□ -1.74
NIT3	P49954	RSR1	YGR152C	819 nt		4.21	□□□□□ -1.74
NIT3	P49954	YIR036W-A	YIR036W-A	402 nt		4.21	□□□□□ -1.74
NIT3	P49954	EMC2	YJR088C	879 nt		4.21	□□□□□ -1.74
NIT3	P49954	ENT3	YJR125C	1227 nt		4.21	□□□□□ -1.74
NIT3	P49954	RPS4A	YJR145C	786 nt		4.21	□□□□□ -1.74
NIT3	P49954	YKL069W	YKL069W	543 nt		4.21	□□□□□ -1.74
NIT3	P49954	YLR428C	YLR428C	345 nt		4.21	□□□□□ -1.74
NIT3	P49954	YML053C	YML053C	639 nt		4.21	□□□□□ -1.74
NIT3	P49954	IMP1	YMR150C	573 nt		4.21	□□□□□ -1.74
NIT3	P49954	HUB1	YNR032C-A	222 nt		4.21	□□□□□ -1.74
NIT3	P49954	YNR034W-A	YNR034W-A	297 nt		4.21	□□□□□ -1.74
NIT3	P49954	YDL199C	YDL199C	2064 nt		4.21	□□□□□ -1.74
NIT3	P49954	SKG3	YLR187W	3081 nt		4.2	□□□□□ -1.74
NIT3	P49954	LST4	YKL176C	2487 nt		4.2	□□□□□ -1.74
NIT3	P49954	HRR25	YPL204W	1485 nt		4.2	□□□□□ -1.74
NIT3	P49954	NTF2	YER009W	378 nt		4.2	□□□□□ -1.74
NIT3	P49954	RIM4	YHL024W	2142 nt		4.2	□□□□□ -1.74
NIT3	P49954	ARC18	YLR370C	537 nt		4.2	□□□□□ -1.74
NIT3	P49954	YPR136C	YPR136C	513 nt		4.2	□□□□□ -1.74
NIT3	P49954	RSC3	YDR303C	2658 nt		4.2	□□□□□ -1.74
NIT3	P49954	NAM2	YLR382C	2685 nt		4.2	□□□□□ -1.74
NIT3	P49954	SEN1	YLR430W	6696 nt		4.2	□□□□□ -1.74
NIT3	P49954	NUG1	YER006W	1563 nt		4.19	□□□□□ -1.74
NIT3	P49954	ITT1	YML068W	1395 nt		4.19	□□□□□ -1.74
NIT3	P49954	YAP1802	YGR241C	1707 nt		4.19	□□□□□ -1.74
NIT3	P49954	YDR114C	YDR114C	303 nt		4.19	□□□□□ -1.74
NIT3	P49954	VPS74	YDR372C	1038 nt		4.19	□□□□□ -1.74
NIT3	P49954	MIG3	YER028C	1185 nt		4.19	□□□□□ -1.74
NIT3	P49954	JAC1	YGL018C	555 nt		4.19	□□□□□ -1.74
NIT3	P49954	COX13	YGL191W	390 nt		4.19	□□□□□ -1.74
NIT3	P49954	YGR161W-C	YGR161W-C	279 nt		4.19	□□□□□ -1.74
NIT3	P49954	RPL16A	YIL133C	600 nt		4.19	□□□□□ -1.74
NIT3	P49954	YIL171W-A	YIL171W-A	453 nt		4.19	□□□□□ -1.74
NIT3	P49954	YJL220W	YJL220W	453 nt		4.19	□□□□□ -1.74
NIT3	P49954	NFU1	YKL040C	771 nt		4.19	□□□□□ -1.74
NIT3	P49954	YNK1	YKL067W	462 nt		4.19	□□□□□ -1.74
NIT3	P49954	VPS51	YKR020W	495 nt		4.19	□□□□□ -1.74
NIT3	P49954	RPL15B	YMR121C	615 nt		4.19	□□□□□ -1.74
NIT3	P49954	RPL18B	YNL301C	561 nt		4.19	□□□□□ -1.74
NIT3	P49954	GCY1	YOR120W	939 nt		4.19	□□□□□ -1.74
NIT3	P49954	FEX1	YOR390W	1128 nt		4.19	□□□□□ -1.74
NIT3	P49954	FEX2	YPL279C	1128 nt		4.19	□□□□□ -1.74
NIT3	P49954	CMD1	YBR109C	444 nt		4.19	□□□□□ -1.74
NIT3	P49954	MPS3	YJL019W	2049 nt		4.19	□□□□□ -1.74
NIT3	P49954	RAD54	YGL163C	2697 nt		4.18	□□□□□ -1.74
NIT3	P49954	SNU56	YDR240C	1479 nt		4.18	□□□□□ -1.74
NIT3	P49954	RAD1	YPL022W	3303 nt		4.18	□□□□□ -1.74
NIT3	P49954	GIP4	YAL031C	2283 nt		4.18	□□□□□ -1.74
NIT3	P49954	RPP1A	YDL081C	321 nt		4.18	□□□□□ -1.74
NIT3	P49954	AGA2	YGL032C	264 nt		4.18	□□□□□ -1.74
NIT3	P49954	PRM8	YGL053W	714 nt		4.18	□□□□□ -1.74
NIT3	P49954	ASG7	YJL170C	630 nt		4.18	□□□□□ -1.74
NIT3	P49954	ATG33	YLR356W	594 nt		4.18	□□□□□ -1.74
NIT3	P49954	PAI3	YMR174C	207 nt		4.18	□□□□□ -1.74
NIT3	P49954	YNL296W	YNL296W	315 nt		4.18	□□□□□ -1.74
NIT3	P49954	GRE2	YOL151W	1029 nt		4.18	□□□□□ -1.74
NIT3	P49954	SUC2	YIL162W	1599 nt		4.18	□□□□□ -1.74
NIT3	P49954	VAC7	YNL054W	3498 nt		4.17	□□□□□ -1.74
NIT3	P49954	YOL019W	YOL019W	1656 nt		4.17	□□□□□ -1.74
NIT3	P49954	XKS1	YGR194C	1803 nt		4.17	□□□□□ -1.74
NIT3	P49954	YER046W-A	YER046W-A	330 nt		4.17	□□□□□ -1.74
NIT3	P49954	TDA2	YER071C	381 nt		4.17	□□□□□ -1.74
NIT3	P49954	ENV10	YLR065C	546 nt		4.17	□□□□□ -1.74
NIT3	P49954	POP3	YNL282W	588 nt		4.17	□□□□□ -1.74
NIT3	P49954	SHG1	YBR258C	429 nt		4.17	□□□□□ -1.74
NIT3	P49954	LAS21	YJL062W	2493 nt		4.17	□□□□□ -1.74
NIT3	P49954	ARP4	YJL081C	1470 nt		4.17	□□□□□ -1.74
NIT3	P49954	SUP35	YDR172W	2058 nt		4.17	□□□□□ -1.74
NIT3	P49954	DAP2	YHR028C	2457 nt		4.16	□□□□□ -1.74
NIT3	P49954	EXO70	YJL085W	1872 nt		4.16	□□□□□ -1.74

Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms