Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC9A3P48764 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC9A3P48764 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
SLC9A3P48764 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SLC9A3P48764 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC9A3P48764 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC9A3P48764 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC9A3P48764 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC9A3P48764 AC131281.2-201ENST00000520478 145 ntBASIC19.36■□□□□ 0.69
SLC9A3P48764 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC9A3P48764 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC9A3P48764 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC9A3P48764 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC9A3P48764 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC9A3P48764 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SLC9A3P48764 Z98882.1-201ENST00000622160 2253 ntBASIC19.36■□□□□ 0.69
SLC9A3P48764 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC9A3P48764 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC9A3P48764 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC9A3P48764 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SLC9A3P48764 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC9A3P48764 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC9A3P48764 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
SLC9A3P48764 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC9A3P48764 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
SLC9A3P48764 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SLC9A3P48764 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC9A3P48764 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC9A3P48764 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SLC9A3P48764 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC9A3P48764 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC9A3P48764 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC9A3P48764 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.35■□□□□ 0.69
SLC9A3P48764 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC9A3P48764 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC9A3P48764 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC9A3P48764 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC9A3P48764 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC9A3P48764 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC9A3P48764 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC9A3P48764 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC9A3P48764 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC9A3P48764 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC9A3P48764 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SLC9A3P48764 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC9A3P48764 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC9A3P48764 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SLC9A3P48764 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC9A3P48764 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SLC9A3P48764 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SLC9A3P48764 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SLC9A3P48764 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC9A3P48764 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.33■□□□□ 0.69
SLC9A3P48764 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
SLC9A3P48764 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC9A3P48764 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC9A3P48764 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.33■□□□□ 0.69
SLC9A3P48764 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SLC9A3P48764 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.33■□□□□ 0.69
SLC9A3P48764 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SLC9A3P48764 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC9A3P48764 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SLC9A3P48764 SLC47A1P1-202ENST00000449666 945 ntBASIC19.33■□□□□ 0.68
SLC9A3P48764 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC9A3P48764 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SLC9A3P48764 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC9A3P48764 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC9A3P48764 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC9A3P48764 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC9A3P48764 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC9A3P48764 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC9A3P48764 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC9A3P48764 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.33■□□□□ 0.68
SLC9A3P48764 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC9A3P48764 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC9A3P48764 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC9A3P48764 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC9A3P48764 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC9A3P48764 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC9A3P48764 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC9A3P48764 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC9A3P48764 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SLC9A3P48764 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC9A3P48764 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC9A3P48764 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
SLC9A3P48764 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC9A3P48764 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC9A3P48764 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
SLC9A3P48764 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SLC9A3P48764 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC9A3P48764 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC9A3P48764 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC9A3P48764 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SLC9A3P48764 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC9A3P48764 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC9A3P48764 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC9A3P48764 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.31■□□□□ 0.68
SLC9A3P48764 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC9A3P48764 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC9A3P48764 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms