Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.15■□□□□ 0.98
RXRGP48443 AC142086.2-201ENST00000569753 217 ntBASIC21.15■□□□□ 0.98
RXRGP48443 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RXRGP48443 AP001160.3-201ENST00000601484 763 ntBASIC21.15■□□□□ 0.98
RXRGP48443 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.15■□□□□ 0.98
RXRGP48443 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RXRGP48443 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RXRGP48443 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.14■□□□□ 0.98
RXRGP48443 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RXRGP48443 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RXRGP48443 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RXRGP48443 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RXRGP48443 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RXRGP48443 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.14■□□□□ 0.97
RXRGP48443 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RXRGP48443 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RXRGP48443 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.14■□□□□ 0.97
RXRGP48443 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RXRGP48443 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.14■□□□□ 0.97
RXRGP48443 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.14■□□□□ 0.97
RXRGP48443 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
RXRGP48443 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RXRGP48443 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RXRGP48443 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RXRGP48443 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RXRGP48443 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RXRGP48443 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RXRGP48443 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RXRGP48443 AC007322.1-201ENST00000426983 750 ntBASIC21.13■□□□□ 0.97
RXRGP48443 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.13■□□□□ 0.97
RXRGP48443 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RXRGP48443 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.13■□□□□ 0.97
RXRGP48443 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RXRGP48443 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.13■□□□□ 0.97
RXRGP48443 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.13■□□□□ 0.97
RXRGP48443 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.13■□□□□ 0.97
RXRGP48443 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.13■□□□□ 0.97
RXRGP48443 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.13■□□□□ 0.97
RXRGP48443 UBE2DNL-204ENST00000602536 740 ntBASIC21.13■□□□□ 0.97
RXRGP48443 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
RXRGP48443 AL050303.2-201ENST00000619798 666 ntBASIC21.13■□□□□ 0.97
RXRGP48443 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.13■□□□□ 0.97
RXRGP48443 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RXRGP48443 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RXRGP48443 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RXRGP48443 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
RXRGP48443 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.13■□□□□ 0.97
RXRGP48443 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.12■□□□□ 0.97
RXRGP48443 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RXRGP48443 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RXRGP48443 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RXRGP48443 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RXRGP48443 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RXRGP48443 AC083906.2-201ENST00000511578 360 ntBASIC21.12■□□□□ 0.97
RXRGP48443 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.12■□□□□ 0.97
RXRGP48443 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.12■□□□□ 0.97
RXRGP48443 MYCNOS-205ENST00000641950 531 ntBASIC21.12■□□□□ 0.97
RXRGP48443 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RXRGP48443 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RXRGP48443 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
RXRGP48443 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RXRGP48443 LINC00565-201ENST00000562710 2331 ntBASIC21.11■□□□□ 0.97
RXRGP48443 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.11■□□□□ 0.97
RXRGP48443 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RXRGP48443 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RXRGP48443 ABHD17AP1-201ENST00000358206 933 ntBASIC21.11■□□□□ 0.97
RXRGP48443 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.11■□□□□ 0.97
RXRGP48443 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RXRGP48443 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.11■□□□□ 0.97
RXRGP48443 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.11■□□□□ 0.97
RXRGP48443 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RXRGP48443 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RXRGP48443 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RXRGP48443 AC127496.7-201ENST00000625110 1798 ntBASIC21.1■□□□□ 0.97
RXRGP48443 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RXRGP48443 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RXRGP48443 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RXRGP48443 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RXRGP48443 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.1■□□□□ 0.97
RXRGP48443 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RXRGP48443 TSPY6P-201ENST00000448518 926 ntBASIC21.1■□□□□ 0.97
RXRGP48443 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.1■□□□□ 0.97
RXRGP48443 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
RXRGP48443 AC005181.1-201ENST00000604782 1256 ntBASIC21.1■□□□□ 0.97
RXRGP48443 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RXRGP48443 RNF165-205ENST00000588679 2904 ntBASIC21.1■□□□□ 0.97
RXRGP48443 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RXRGP48443 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RXRGP48443 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
RXRGP48443 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
RXRGP48443 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RXRGP48443 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RXRGP48443 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RXRGP48443 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RXRGP48443 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.09■□□□□ 0.97
RXRGP48443 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RXRGP48443 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
RXRGP48443 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RXRGP48443 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.09■□□□□ 0.97
RXRGP48443 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms