Protein–RNA interactions for Protein: P47100

TY1B-JR2, Transposon Ty1-JR2 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR2P47100 ASP1YDR321W 1146 nt2.85□□□□□ -1.95
TY1B-JR2P47100 YHR086W-AYHR086W-A 162 nt2.84□□□□□ -1.95
TY1B-JR2P47100 IDI1YPL117C 867 nt2.84□□□□□ -1.95
TY1B-JR2P47100 STT4YLR305C 5703 nt2.84□□□□□ -1.95
TY1B-JR2P47100 CUS1YMR240C 1311 nt2.84□□□□□ -1.95
TY1B-JR2P47100 YAL065CYAL065C 387 nt2.84□□□□□ -1.96
TY1B-JR2P47100 GTR1YML121W 933 nt2.84□□□□□ -1.96
TY1B-JR2P47100 ATP3YBR039W 936 nt2.84□□□□□ -1.96
TY1B-JR2P47100 BSD2YBR290W 966 nt2.84□□□□□ -1.96
TY1B-JR2P47100 CDC24YAL041W 2565 nt2.83□□□□□ -1.96
TY1B-JR2P47100 YGL132WYGL132W 336 nt2.83□□□□□ -1.96
TY1B-JR2P47100 MDV1YJL112W 2145 nt2.82□□□□□ -1.96
TY1B-JR2P47100 RPS31YLR167W 459 nt2.82□□□□□ -1.96
TY1B-JR2P47100 REH1YLR387C 1299 nt2.82□□□□□ -1.96
TY1B-JR2P47100 PEX17YNL214W 600 nt2.82□□□□□ -1.96
TY1B-JR2P47100 RPC40YPR110C 1008 nt2.82□□□□□ -1.96
TY1B-JR2P47100 LAA1YJL207C 6045 nt2.81□□□□□ -1.96
TY1B-JR2P47100 CAT8YMR280C 4302 nt2.81□□□□□ -1.96
TY1B-JR2P47100 TDA3YHR009C 1572 nt2.81□□□□□ -1.96
TY1B-JR2P47100 ALO1YML086C 1581 nt2.81□□□□□ -1.96
TY1B-JR2P47100 ADI1YMR009W 540 nt2.81□□□□□ -1.96
TY1B-JR2P47100 SLD7YOR060C 774 nt2.81□□□□□ -1.96
TY1B-JR2P47100 YBR197CYBR197C 654 nt2.81□□□□□ -1.96
TY1B-JR2P47100 BOS1YLR078C 735 nt2.8□□□□□ -1.96
TY1B-JR2P47100 YLR326WYLR326W 723 nt2.8□□□□□ -1.96
TY1B-JR2P47100 COA6YMR244C-A 315 nt2.8□□□□□ -1.96
TY1B-JR2P47100 MSH3YCR092C 3057 nt2.8□□□□□ -1.96
TY1B-JR2P47100 YCR013CYCR013C 648 nt2.79□□□□□ -1.96
TY1B-JR2P47100 MIX14YDR031W 366 nt2.79□□□□□ -1.96
TY1B-JR2P47100 ERG9YHR190W 1335 nt2.79□□□□□ -1.96
TY1B-JR2P47100 NUF2YOL069W 1356 nt2.79□□□□□ -1.96
TY1B-JR2P47100 TRS130YMR218C 3309 nt2.79□□□□□ -1.96
TY1B-JR2P47100 MMS1YPR164W 4224 nt2.79□□□□□ -1.96
TY1B-JR2P47100 TIF35YDR429C 825 nt2.79□□□□□ -1.96
TY1B-JR2P47100 YHR073W-AYHR073W-A 177 nt2.79□□□□□ -1.96
TY1B-JR2P47100 YPR147CYPR147C 915 nt2.79□□□□□ -1.96
TY1B-JR2P47100 CBP1YJL209W 1965 nt2.79□□□□□ -1.96
TY1B-JR2P47100 ESC1YMR219W 4977 nt2.78□□□□□ -1.96
TY1B-JR2P47100 NFI1YOR156C 2181 nt2.78□□□□□ -1.96
TY1B-JR2P47100 TOF1YNL273W 3717 nt2.78□□□□□ -1.96
TY1B-JR2P47100 BRR6YGL247W 594 nt2.78□□□□□ -1.96
TY1B-JR2P47100 YJL147CYJL147C 1149 nt2.78□□□□□ -1.96
TY1B-JR2P47100 ELO3YLR372W 1038 nt2.78□□□□□ -1.96
TY1B-JR2P47100 TPD3YAL016W 1908 nt2.78□□□□□ -1.96
TY1B-JR2P47100 MIF2YKL089W 1650 nt2.78□□□□□ -1.96
TY1B-JR2P47100 SMP1YBR182C 1359 nt2.78□□□□□ -1.96
TY1B-JR2P47100 YDR089WYDR089W 2610 nt2.78□□□□□ -1.96
TY1B-JR2P47100 JID1YPR061C 906 nt2.77□□□□□ -1.97
TY1B-JR2P47100 VPH1YOR270C 2523 nt2.77□□□□□ -1.97
TY1B-JR2P47100 TFC1YBR123C 1950 nt2.77□□□□□ -1.97
TY1B-JR2P47100 YNR071CYNR071C 1029 nt2.77□□□□□ -1.97
TY1B-JR2P47100 MDS3YGL197W 4464 nt2.76□□□□□ -1.97
TY1B-JR2P47100 SPS4YOR313C 1017 nt2.76□□□□□ -1.97
TY1B-JR2P47100 JSN1YJR091C 3276 nt2.76□□□□□ -1.97
TY1B-JR2P47100 SAS4YDR181C 1446 nt2.76□□□□□ -1.97
TY1B-JR2P47100 YDR131CYDR131C 1671 nt2.75□□□□□ -1.97
TY1B-JR2P47100 ALY1YKR021W 2748 nt2.75□□□□□ -1.97
TY1B-JR2P47100 MGR3YMR115W 1506 nt2.74□□□□□ -1.97
TY1B-JR2P47100 YEL018C-AYEL018C-A 534 nt2.74□□□□□ -1.97
TY1B-JR2P47100 SOL3YHR163W 750 nt2.74□□□□□ -1.97
TY1B-JR2P47100 YMR310CYMR310C 954 nt2.74□□□□□ -1.97
TY1B-JR2P47100 ARF3YOR094W 552 nt2.74□□□□□ -1.97
TY1B-JR2P47100 YOR333CYOR333C 417 nt2.74□□□□□ -1.97
TY1B-JR2P47100 GIS1YDR096W 2685 nt2.74□□□□□ -1.97
TY1B-JR2P47100 SRS2YJL092W 3525 nt2.74□□□□□ -1.97
TY1B-JR2P47100 SET1YHR119W 3243 nt2.74□□□□□ -1.97
TY1B-JR2P47100 YKR078WYKR078W 1758 nt2.74□□□□□ -1.97
TY1B-JR2P47100 ADK2YER170W 678 nt2.74□□□□□ -1.97
TY1B-JR2P47100 SXM1YDR395W 2835 nt2.74□□□□□ -1.97
TY1B-JR2P47100 BCS1YDR375C 1371 nt2.73□□□□□ -1.97
TY1B-JR2P47100 PSR1YLL010C 1284 nt2.73□□□□□ -1.97
TY1B-JR2P47100 VAM10YOR068C 345 nt2.73□□□□□ -1.97
TY1B-JR2P47100 TTI1YKL033W 3117 nt2.73□□□□□ -1.97
TY1B-JR2P47100 DOT6YER088C 2013 nt2.73□□□□□ -1.97
TY1B-JR2P47100 EXO84YBR102C 2262 nt2.73□□□□□ -1.97
TY1B-JR2P47100 YER165C-AYER165C-A 357 nt2.72□□□□□ -1.97
TY1B-JR2P47100 PET191YJR034W 327 nt2.72□□□□□ -1.97
TY1B-JR2P47100 GUK1YDR454C 564 nt2.72□□□□□ -1.97
TY1B-JR2P47100 TRM13YOL125W 1431 nt2.71□□□□□ -1.98
TY1B-JR2P47100 CYC1YJR048W 330 nt2.71□□□□□ -1.98
TY1B-JR2P47100 SET6YPL165C 1122 nt2.71□□□□□ -1.98
TY1B-JR2P47100 STH1YIL126W 4080 nt2.71□□□□□ -1.98
TY1B-JR2P47100 YJR039WYJR039W 3366 nt2.71□□□□□ -1.98
TY1B-JR2P47100 MEI5YPL121C 669 nt2.7□□□□□ -1.98
TY1B-JR2P47100 VPS72YDR485C 2388 nt2.7□□□□□ -1.98
TY1B-JR2P47100 COS4YFL062W 1140 nt2.69□□□□□ -1.98
TY1B-JR2P47100 YIR040CYIR040C 333 nt2.69□□□□□ -1.98
TY1B-JR2P47100 YMR194C-AYMR194C-A 225 nt2.69□□□□□ -1.98
TY1B-JR2P47100 SKI3YPR189W 4299 nt2.69□□□□□ -1.98
TY1B-JR2P47100 PSK1YAL017W 4071 nt2.69□□□□□ -1.98
TY1B-JR2P47100 YDL162CYDL162C 357 nt2.69□□□□□ -1.98
TY1B-JR2P47100 YIL024CYIL024C 570 nt2.69□□□□□ -1.98
TY1B-JR2P47100 VPS34YLR240W 2628 nt2.69□□□□□ -1.98
TY1B-JR2P47100 MRM1YOR201C 1239 nt2.69□□□□□ -1.98
TY1B-JR2P47100 YOR238WYOR238W 912 nt2.69□□□□□ -1.98
TY1B-JR2P47100 ECM29YHL030W 5607 nt2.68□□□□□ -1.98
TY1B-JR2P47100 YBL012CYBL012C 402 nt2.68□□□□□ -1.98
TY1B-JR2P47100 RPL27BYDR471W 411 nt2.67□□□□□ -1.98
TY1B-JR2P47100 YAL026C-AYAL026C-A 438 nt2.67□□□□□ -1.98
TY1B-JR2P47100 SEN54YPL083C 1404 nt2.67□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 18.5 ms