Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 MSB2YGR014W 3921 nt2.41□□□□□ -2.02
CUP9P41817 DUF1YOL087C 3351 nt2.41□□□□□ -2.02
CUP9P41817 RIM1YCR028C-A 408 nt2.41□□□□□ -2.02
CUP9P41817 RNR2YJL026W 1200 nt2.41□□□□□ -2.02
CUP9P41817 MRPL49YJL096W 486 nt2.41□□□□□ -2.02
CUP9P41817 HUB1YNR032C-A 222 nt2.41□□□□□ -2.02
CUP9P41817 AIM41YOR215C 558 nt2.41□□□□□ -2.02
CUP9P41817 HSH49YOR319W 642 nt2.41□□□□□ -2.02
CUP9P41817 INP52YNL106C 3552 nt2.4□□□□□ -2.02
CUP9P41817 YLR001CYLR001C 2589 nt2.4□□□□□ -2.02
CUP9P41817 DBP7YKR024C 2229 nt2.4□□□□□ -2.03
CUP9P41817 RRP1YDR087C 837 nt2.4□□□□□ -2.03
CUP9P41817 PRE1YER012W 597 nt2.4□□□□□ -2.03
CUP9P41817 PEX21YGR239C 867 nt2.4□□□□□ -2.03
CUP9P41817 YAP5YIR018W 738 nt2.4□□□□□ -2.03
CUP9P41817 MDV1YJL112W 2145 nt2.4□□□□□ -2.03
CUP9P41817 IME1YJR094C 1083 nt2.4□□□□□ -2.03
CUP9P41817 YLR257WYLR257W 966 nt2.4□□□□□ -2.03
CUP9P41817 VBA4YDR119W 2307 nt2.4□□□□□ -2.03
CUP9P41817 KRE2YDR483W 1329 nt2.4□□□□□ -2.03
CUP9P41817 HMS1YOR032C 1305 nt2.4□□□□□ -2.03
CUP9P41817 YLR278CYLR278C 4026 nt2.39□□□□□ -2.03
CUP9P41817 BCK1YJL095W 4437 nt2.39□□□□□ -2.03
CUP9P41817 YGR237CYGR237C 2358 nt2.39□□□□□ -2.03
CUP9P41817 NFT1YKR103W 3657 nt2.39□□□□□ -2.03
CUP9P41817 CLG1YGL215W 1359 nt2.39□□□□□ -2.03
CUP9P41817 PHO81YGR233C 3537 nt2.39□□□□□ -2.03
CUP9P41817 NUM1YDR150W 8247 nt2.39□□□□□ -2.03
CUP9P41817 SDP1YIL113W 630 nt2.39□□□□□ -2.03
CUP9P41817 YIR014WYIR014W 729 nt2.39□□□□□ -2.03
CUP9P41817 SSN8YNL025C 972 nt2.39□□□□□ -2.03
CUP9P41817 APM1YPL259C 1428 nt2.39□□□□□ -2.03
CUP9P41817 SIN4YNL236W 2925 nt2.39□□□□□ -2.03
CUP9P41817 RPN3YER021W 1572 nt2.39□□□□□ -2.03
CUP9P41817 YJL132WYJL132W 2253 nt2.39□□□□□ -2.03
CUP9P41817 VPS41YDR080W 2979 nt2.39□□□□□ -2.03
CUP9P41817 JSN1YJR091C 3276 nt2.39□□□□□ -2.03
CUP9P41817 MPC54YOR177C 1395 nt2.38□□□□□ -2.03
CUP9P41817 CDC20YGL116W 1833 nt2.38□□□□□ -2.03
CUP9P41817 TAM41YGR046W 1158 nt2.38□□□□□ -2.03
CUP9P41817 PEX18YHR160C 852 nt2.38□□□□□ -2.03
CUP9P41817 RPS22AYJL190C 393 nt2.38□□□□□ -2.03
CUP9P41817 SEC65YML105C 822 nt2.38□□□□□ -2.03
CUP9P41817 MFA2YNL145W 117 nt2.38□□□□□ -2.03
CUP9P41817 PNT1YOR266W 1272 nt2.38□□□□□ -2.03
CUP9P41817 UAF30YOR295W 687 nt2.38□□□□□ -2.03
CUP9P41817 PPT2YPL148C 522 nt2.38□□□□□ -2.03
CUP9P41817 YPR203WYPR203W 309 nt2.38□□□□□ -2.03
CUP9P41817 YMR1YJR110W 2067 nt2.38□□□□□ -2.03
CUP9P41817 RPO41YFL036W 4056 nt2.38□□□□□ -2.03
CUP9P41817 YDR186CYDR186C 2634 nt2.38□□□□□ -2.03
CUP9P41817 SEC59YMR013C 1560 nt2.37□□□□□ -2.03
CUP9P41817 NDC80YIL144W 2076 nt2.37□□□□□ -2.03
CUP9P41817 AYT1YLL063C 1425 nt2.37□□□□□ -2.03
CUP9P41817 UBP8YMR223W 1416 nt2.37□□□□□ -2.03
CUP9P41817 APC11YDL008W 498 nt2.37□□□□□ -2.03
CUP9P41817 AML1YGR001C 747 nt2.37□□□□□ -2.03
CUP9P41817 YHR032W-AYHR032W-A 180 nt2.37□□□□□ -2.03
CUP9P41817 YHR086W-AYHR086W-A 162 nt2.37□□□□□ -2.03
CUP9P41817 CPR7YJR032W 1182 nt2.37□□□□□ -2.03
CUP9P41817 PAU23YLR037C 375 nt2.37□□□□□ -2.03
CUP9P41817 TMA10YLR327C 261 nt2.37□□□□□ -2.03
CUP9P41817 YLR416CYLR416C 399 nt2.37□□□□□ -2.03
CUP9P41817 HHF2YNL030W 312 nt2.37□□□□□ -2.03
CUP9P41817 MYO5YMR109W 3660 nt2.37□□□□□ -2.03
CUP9P41817 PUF6YDR496C 1971 nt2.37□□□□□ -2.03
CUP9P41817 MGR3YMR115W 1506 nt2.37□□□□□ -2.03
CUP9P41817 YCL076WYCL076W 744 nt2.36□□□□□ -2.03
CUP9P41817 SHU2YDR078C 672 nt2.36□□□□□ -2.03
CUP9P41817 SPT2YER161C 1002 nt2.36□□□□□ -2.03
CUP9P41817 PNC1YGL037C 651 nt2.36□□□□□ -2.03
CUP9P41817 YHR213WYHR213W 597 nt2.36□□□□□ -2.03
CUP9P41817 SWD2YKL018W 990 nt2.36□□□□□ -2.03
CUP9P41817 EMC6YLL014W 327 nt2.36□□□□□ -2.03
CUP9P41817 YAR062WYAR062W 597 nt2.36□□□□□ -2.03
CUP9P41817 YLR347W-AYLR347W-A 141 nt2.36□□□□□ -2.03
CUP9P41817 HHF1YBR009C 312 nt2.36□□□□□ -2.03
CUP9P41817 PTP3YER075C 2787 nt2.36□□□□□ -2.03
CUP9P41817 PRP8YHR165C 7242 nt2.35□□□□□ -2.03
CUP9P41817 MSS2YDL107W 1056 nt2.35□□□□□ -2.03
CUP9P41817 YDR340WYDR340W 303 nt2.35□□□□□ -2.03
CUP9P41817 YGR026WYGR026W 837 nt2.35□□□□□ -2.03
CUP9P41817 YGR149WYGR149W 1299 nt2.35□□□□□ -2.03
CUP9P41817 SPO16YHR153C 597 nt2.35□□□□□ -2.03
CUP9P41817 CAB2YIL083C 1098 nt2.35□□□□□ -2.03
CUP9P41817 YKL066WYKL066W 444 nt2.35□□□□□ -2.03
CUP9P41817 YAR075WYAR075W 474 nt2.35□□□□□ -2.03
CUP9P41817 MED11YMR112C 396 nt2.35□□□□□ -2.03
CUP9P41817 RPB8YOR224C 441 nt2.35□□□□□ -2.03
CUP9P41817 YCR045W-AYCR045W-A 351 nt2.34□□□□□ -2.03
CUP9P41817 RPB9YGL070C 369 nt2.34□□□□□ -2.03
CUP9P41817 MPS2YGL075C 1164 nt2.34□□□□□ -2.03
CUP9P41817 YIL174WYIL174W 228 nt2.34□□□□□ -2.03
CUP9P41817 YJL222W-AYJL222W-A 228 nt2.34□□□□□ -2.03
CUP9P41817 RFM1YOR279C 933 nt2.34□□□□□ -2.03
CUP9P41817 CBP2YHL038C 1893 nt2.34□□□□□ -2.03
CUP9P41817 SEC26YDR238C 2922 nt2.34□□□□□ -2.04
CUP9P41817 AXL1YPR122W 3627 nt2.34□□□□□ -2.04
CUP9P41817 CIN1YOR349W 3045 nt2.34□□□□□ -2.04
CUP9P41817 ESC1YMR219W 4977 nt2.33□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 28.5 ms