Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HADHAP40939 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.43■■□□□ 1.02
HADHAP40939 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
HADHAP40939 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HADHAP40939 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.43■■□□□ 1.02
HADHAP40939 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HADHAP40939 IRS3P-201ENST00000223076 1006 ntBASIC21.42■■□□□ 1.02
HADHAP40939 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HADHAP40939 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HADHAP40939 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HADHAP40939 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HADHAP40939 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HADHAP40939 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.42■■□□□ 1.02
HADHAP40939 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HADHAP40939 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.42■■□□□ 1.02
HADHAP40939 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.42■■□□□ 1.02
HADHAP40939 AC104564.3-201ENST00000582367 638 ntBASIC21.42■■□□□ 1.02
HADHAP40939 AL358852.1-201ENST00000623174 1268 ntBASIC21.42■■□□□ 1.02
HADHAP40939 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
HADHAP40939 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HADHAP40939 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.41■■□□□ 1.02
HADHAP40939 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HADHAP40939 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HADHAP40939 BX005040.4-201ENST00000637145 1518 ntBASIC21.41■■□□□ 1.02
HADHAP40939 AC009237.3-201ENST00000393279 1427 ntBASIC21.41■■□□□ 1.02
HADHAP40939 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
HADHAP40939 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.41■■□□□ 1.02
HADHAP40939 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.41■■□□□ 1.02
HADHAP40939 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.41■■□□□ 1.02
HADHAP40939 AC012414.1-201ENST00000556676 535 ntBASIC21.41■■□□□ 1.02
HADHAP40939 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HADHAP40939 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HADHAP40939 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HADHAP40939 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
HADHAP40939 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
HADHAP40939 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HADHAP40939 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.4■■□□□ 1.02
HADHAP40939 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
HADHAP40939 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HADHAP40939 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HADHAP40939 Z98882.1-201ENST00000622160 2253 ntBASIC21.4■■□□□ 1.02
HADHAP40939 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.4■■□□□ 1.02
HADHAP40939 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HADHAP40939 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HADHAP40939 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HADHAP40939 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
HADHAP40939 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
HADHAP40939 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
HADHAP40939 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HADHAP40939 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.39■■□□□ 1.02
HADHAP40939 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
HADHAP40939 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HADHAP40939 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HADHAP40939 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
HADHAP40939 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
HADHAP40939 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.39■■□□□ 1.01
HADHAP40939 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
HADHAP40939 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HADHAP40939 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.39■■□□□ 1.01
HADHAP40939 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HADHAP40939 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
HADHAP40939 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.39■■□□□ 1.01
HADHAP40939 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.01
HADHAP40939 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HADHAP40939 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HADHAP40939 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
HADHAP40939 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.38■■□□□ 1.01
HADHAP40939 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.38■■□□□ 1.01
HADHAP40939 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
HADHAP40939 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HADHAP40939 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HADHAP40939 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HADHAP40939 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.38■■□□□ 1.01
HADHAP40939 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.38■■□□□ 1.01
HADHAP40939 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HADHAP40939 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
HADHAP40939 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.38■■□□□ 1.01
HADHAP40939 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HADHAP40939 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.38■■□□□ 1.01
HADHAP40939 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HADHAP40939 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.38■■□□□ 1.01
HADHAP40939 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
HADHAP40939 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HADHAP40939 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
HADHAP40939 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.38■■□□□ 1.01
HADHAP40939 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.38■■□□□ 1.01
HADHAP40939 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.38■■□□□ 1.01
HADHAP40939 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HADHAP40939 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HADHAP40939 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HADHAP40939 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HADHAP40939 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HADHAP40939 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HADHAP40939 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HADHAP40939 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.37■■□□□ 1.01
HADHAP40939 AP006587.3-201ENST00000525742 1516 ntBASIC21.37■■□□□ 1.01
HADHAP40939 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HADHAP40939 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HADHAP40939 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.37■■□□□ 1.01
HADHAP40939 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms