Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT20P35900 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.07■□□□□ 0.8
KRT20P35900 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
KRT20P35900 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT20P35900 OXCT2P1-201ENST00000447263 1535 ntBASIC20.07■□□□□ 0.8
KRT20P35900 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT20P35900 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT20P35900 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT20P35900 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.06■□□□□ 0.8
KRT20P35900 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT20P35900 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.06■□□□□ 0.8
KRT20P35900 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT20P35900 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
KRT20P35900 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT20P35900 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
KRT20P35900 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT20P35900 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT20P35900 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
KRT20P35900 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT20P35900 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT20P35900 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT20P35900 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT20P35900 AC079089.2-201ENST00000531211 1277 ntBASIC20.05■□□□□ 0.8
KRT20P35900 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.05■□□□□ 0.8
KRT20P35900 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT20P35900 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.05■□□□□ 0.8
KRT20P35900 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT20P35900 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT20P35900 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT20P35900 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT20P35900 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT20P35900 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT20P35900 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT20P35900 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
KRT20P35900 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT20P35900 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT20P35900 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT20P35900 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT20P35900 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
KRT20P35900 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT20P35900 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT20P35900 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT20P35900 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT20P35900 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
KRT20P35900 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT20P35900 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT20P35900 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
KRT20P35900 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
KRT20P35900 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT20P35900 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT20P35900 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT20P35900 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.03■□□□□ 0.8
KRT20P35900 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT20P35900 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT20P35900 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT20P35900 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT20P35900 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT20P35900 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.03■□□□□ 0.8
KRT20P35900 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.03■□□□□ 0.8
KRT20P35900 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT20P35900 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT20P35900 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.03■□□□□ 0.8
KRT20P35900 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT20P35900 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT20P35900 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT20P35900 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT20P35900 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT20P35900 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT20P35900 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
KRT20P35900 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT20P35900 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT20P35900 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KRT20P35900 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KRT20P35900 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
KRT20P35900 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.02■□□□□ 0.8
KRT20P35900 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.02■□□□□ 0.8
KRT20P35900 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
KRT20P35900 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.02■□□□□ 0.8
KRT20P35900 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
KRT20P35900 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
KRT20P35900 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KRT20P35900 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
KRT20P35900 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.02■□□□□ 0.79
KRT20P35900 OR7E47P-201ENST00000546390 1422 ntBASIC20.02■□□□□ 0.79
KRT20P35900 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT20P35900 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT20P35900 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT20P35900 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT20P35900 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT20P35900 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT20P35900 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT20P35900 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.01■□□□□ 0.79
KRT20P35900 AC105265.2-201ENST00000467189 838 ntBASIC20.01■□□□□ 0.79
KRT20P35900 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.01■□□□□ 0.79
KRT20P35900 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT20P35900 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT20P35900 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT20P35900 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT20P35900 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT20P35900 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms