Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GDF1P27539 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GDF1P27539 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GDF1P27539 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GDF1P27539 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
GDF1P27539 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.25■□□□□ 0.67
GDF1P27539 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.25■□□□□ 0.67
GDF1P27539 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GDF1P27539 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.25■□□□□ 0.67
GDF1P27539 AC242852.2-201ENST00000615738 1807 ntBASIC19.25■□□□□ 0.67
GDF1P27539 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
GDF1P27539 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GDF1P27539 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GDF1P27539 GUSBP5-202ENST00000510805 1989 ntBASIC19.24■□□□□ 0.67
GDF1P27539 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
GDF1P27539 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.24■□□□□ 0.67
GDF1P27539 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
GDF1P27539 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.24■□□□□ 0.67
GDF1P27539 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
GDF1P27539 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.24■□□□□ 0.67
GDF1P27539 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GDF1P27539 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
GDF1P27539 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GDF1P27539 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.24■□□□□ 0.67
GDF1P27539 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
GDF1P27539 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.24■□□□□ 0.67
GDF1P27539 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GDF1P27539 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
GDF1P27539 AC073111.5-205ENST00000641717 521 ntBASIC19.24■□□□□ 0.67
GDF1P27539 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GDF1P27539 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GDF1P27539 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GDF1P27539 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
GDF1P27539 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.23■□□□□ 0.67
GDF1P27539 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
GDF1P27539 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GDF1P27539 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GDF1P27539 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GDF1P27539 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GDF1P27539 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GDF1P27539 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GDF1P27539 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.23■□□□□ 0.67
GDF1P27539 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GDF1P27539 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.23■□□□□ 0.67
GDF1P27539 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.23■□□□□ 0.67
GDF1P27539 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.23■□□□□ 0.67
GDF1P27539 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GDF1P27539 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GDF1P27539 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.23■□□□□ 0.67
GDF1P27539 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GDF1P27539 AC003102.1-202ENST00000563394 1796 ntBASIC19.23■□□□□ 0.67
GDF1P27539 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GDF1P27539 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GDF1P27539 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GDF1P27539 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GDF1P27539 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GDF1P27539 FAM99A-202ENST00000538190 1989 ntBASIC19.23■□□□□ 0.67
GDF1P27539 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GDF1P27539 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
GDF1P27539 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GDF1P27539 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GDF1P27539 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GDF1P27539 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.22■□□□□ 0.67
GDF1P27539 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
GDF1P27539 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
GDF1P27539 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.22■□□□□ 0.67
GDF1P27539 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.22■□□□□ 0.67
GDF1P27539 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GDF1P27539 KRT18P20-201ENST00000548986 1279 ntBASIC19.22■□□□□ 0.67
GDF1P27539 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.22■□□□□ 0.67
GDF1P27539 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.22■□□□□ 0.67
GDF1P27539 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GDF1P27539 MFSD11-216ENST00000590393 1141 ntBASIC19.22■□□□□ 0.67
GDF1P27539 AC008175.2-201ENST00000612840 297 ntBASIC19.22■□□□□ 0.67
GDF1P27539 MYCNOS-205ENST00000641950 531 ntBASIC19.22■□□□□ 0.67
GDF1P27539 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GDF1P27539 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
GDF1P27539 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GDF1P27539 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.22■□□□□ 0.67
GDF1P27539 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
GDF1P27539 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GDF1P27539 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GDF1P27539 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GDF1P27539 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GDF1P27539 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GDF1P27539 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GDF1P27539 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.21■□□□□ 0.67
GDF1P27539 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.21■□□□□ 0.67
GDF1P27539 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.21■□□□□ 0.67
GDF1P27539 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.21■□□□□ 0.67
GDF1P27539 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.21■□□□□ 0.67
GDF1P27539 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GDF1P27539 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.21■□□□□ 0.67
GDF1P27539 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GDF1P27539 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GDF1P27539 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GDF1P27539 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GDF1P27539 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GDF1P27539 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GDF1P27539 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms