Protein–RNA interactions for Protein: P26441

CNTF, Ciliary neurotrophic factor, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFP26441 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNTFP26441 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNTFP26441 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNTFP26441 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.15■□□□□ 0.98
CNTFP26441 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.15■□□□□ 0.98
CNTFP26441 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNTFP26441 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNTFP26441 AL157384.1-201ENST00000445995 2473 ntBASIC21.15■□□□□ 0.98
CNTFP26441 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNTFP26441 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CNTFP26441 SYT6-210ENST00000641643 1587 ntBASIC21.14■□□□□ 0.98
CNTFP26441 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CNTFP26441 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CNTFP26441 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.14■□□□□ 0.98
CNTFP26441 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.14■□□□□ 0.98
CNTFP26441 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CNTFP26441 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CNTFP26441 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CNTFP26441 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNTFP26441 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNTFP26441 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
CNTFP26441 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.14■□□□□ 0.97
CNTFP26441 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNTFP26441 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNTFP26441 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.14■□□□□ 0.97
CNTFP26441 AC011298.3-201ENST00000615796 283 ntBASIC21.14■□□□□ 0.97
CNTFP26441 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNTFP26441 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNTFP26441 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNTFP26441 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CNTFP26441 AP006587.3-201ENST00000525742 1516 ntBASIC21.14■□□□□ 0.97
CNTFP26441 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNTFP26441 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.13■□□□□ 0.97
CNTFP26441 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNTFP26441 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNTFP26441 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNTFP26441 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CNTFP26441 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.13■□□□□ 0.97
CNTFP26441 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNTFP26441 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CNTFP26441 SERBP1P1-201ENST00000396021 1160 ntBASIC21.13■□□□□ 0.97
CNTFP26441 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNTFP26441 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNTFP26441 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNTFP26441 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNTFP26441 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNTFP26441 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNTFP26441 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNTFP26441 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.12■□□□□ 0.97
CNTFP26441 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.12■□□□□ 0.97
CNTFP26441 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNTFP26441 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.12■□□□□ 0.97
CNTFP26441 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNTFP26441 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNTFP26441 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.12■□□□□ 0.97
CNTFP26441 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CNTFP26441 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CNTFP26441 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.12■□□□□ 0.97
CNTFP26441 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.12■□□□□ 0.97
CNTFP26441 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CNTFP26441 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.12■□□□□ 0.97
CNTFP26441 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CNTFP26441 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNTFP26441 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNTFP26441 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNTFP26441 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNTFP26441 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CNTFP26441 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNTFP26441 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNTFP26441 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.11■□□□□ 0.97
CNTFP26441 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CNTFP26441 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.11■□□□□ 0.97
CNTFP26441 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.11■□□□□ 0.97
CNTFP26441 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.11■□□□□ 0.97
CNTFP26441 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CNTFP26441 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CNTFP26441 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CNTFP26441 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CNTFP26441 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNTFP26441 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.11■□□□□ 0.97
CNTFP26441 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNTFP26441 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNTFP26441 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNTFP26441 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTFP26441 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CNTFP26441 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.1■□□□□ 0.97
CNTFP26441 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTFP26441 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTFP26441 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTFP26441 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNTFP26441 SLC47A1P1-202ENST00000449666 945 ntBASIC21.1■□□□□ 0.97
CNTFP26441 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.1■□□□□ 0.97
CNTFP26441 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.1■□□□□ 0.97
CNTFP26441 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTFP26441 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.1■□□□□ 0.97
CNTFP26441 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTFP26441 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTFP26441 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTFP26441 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTFP26441 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms