Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP24386 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP24386 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.76■□□□□ 0.75
CHMP24386 AL358852.1-201ENST00000623174 1268 ntBASIC19.76■□□□□ 0.75
CHMP24386 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP24386 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
CHMP24386 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP24386 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP24386 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP24386 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP24386 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP24386 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP24386 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP24386 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.75■□□□□ 0.75
CHMP24386 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP24386 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP24386 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP24386 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CHMP24386 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.75■□□□□ 0.75
CHMP24386 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.75■□□□□ 0.75
CHMP24386 AC010141.3-201ENST00000456659 717 ntBASIC19.75■□□□□ 0.75
CHMP24386 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.75■□□□□ 0.75
CHMP24386 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.75■□□□□ 0.75
CHMP24386 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
CHMP24386 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP24386 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP24386 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CHMP24386 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP24386 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP24386 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CHMP24386 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP24386 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP24386 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP24386 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP24386 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP24386 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP24386 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP24386 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP24386 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP24386 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMP24386 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.74■□□□□ 0.75
CHMP24386 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMP24386 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CHMP24386 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CHMP24386 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP24386 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMP24386 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMP24386 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMP24386 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP24386 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP24386 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.73■□□□□ 0.75
CHMP24386 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP24386 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.73■□□□□ 0.75
CHMP24386 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CHMP24386 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP24386 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP24386 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP24386 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CHMP24386 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CHMP24386 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP24386 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.73■□□□□ 0.75
CHMP24386 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
CHMP24386 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.73■□□□□ 0.75
CHMP24386 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP24386 AC026271.2-201ENST00000428091 497 ntBASIC19.73■□□□□ 0.75
CHMP24386 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.73■□□□□ 0.75
CHMP24386 AL354811.1-201ENST00000610286 706 ntBASIC19.73■□□□□ 0.75
CHMP24386 MIR5787-201ENST00000611784 55 ntBASIC19.73■□□□□ 0.75
CHMP24386 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.73■□□□□ 0.75
CHMP24386 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP24386 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP24386 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP24386 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP24386 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP24386 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP24386 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP24386 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP24386 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP24386 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP24386 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CHMP24386 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.72■□□□□ 0.75
CHMP24386 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP24386 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.72■□□□□ 0.75
CHMP24386 MIR6821-201ENST00000617625 74 ntBASIC19.72■□□□□ 0.75
CHMP24386 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP24386 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP24386 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP24386 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
CHMP24386 AF106564.1-201ENST00000607058 2553 ntBASIC19.72■□□□□ 0.75
CHMP24386 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP24386 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP24386 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP24386 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CHMP24386 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP24386 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP24386 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP24386 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP24386 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP24386 AC097381.1-201ENST00000429019 1296 ntBASIC19.71■□□□□ 0.75
CHMP24386 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms