Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCKDHBP21953 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCKDHBP21953 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BCKDHBP21953 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCKDHBP21953 RBM17P2-201ENST00000616397 1405 ntBASIC21.11■□□□□ 0.97
BCKDHBP21953 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BCKDHBP21953 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BCKDHBP21953 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BCKDHBP21953 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
BCKDHBP21953 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.1■□□□□ 0.97
BCKDHBP21953 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
BCKDHBP21953 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.1■□□□□ 0.97
BCKDHBP21953 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.1■□□□□ 0.97
BCKDHBP21953 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
BCKDHBP21953 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.1■□□□□ 0.97
BCKDHBP21953 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BCKDHBP21953 AC128676.1-201ENST00000454392 318 ntBASIC21.1■□□□□ 0.97
BCKDHBP21953 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.1■□□□□ 0.97
BCKDHBP21953 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.1■□□□□ 0.97
BCKDHBP21953 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.1■□□□□ 0.97
BCKDHBP21953 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
BCKDHBP21953 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
BCKDHBP21953 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
BCKDHBP21953 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
BCKDHBP21953 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BCKDHBP21953 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BCKDHBP21953 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BCKDHBP21953 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.1■□□□□ 0.97
BCKDHBP21953 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
BCKDHBP21953 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BCKDHBP21953 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
BCKDHBP21953 POU5F1P4-201ENST00000413175 1085 ntBASIC21.09■□□□□ 0.97
BCKDHBP21953 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.09■□□□□ 0.97
BCKDHBP21953 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.09■□□□□ 0.97
BCKDHBP21953 AC142381.4-202ENST00000563973 229 ntBASIC21.09■□□□□ 0.97
BCKDHBP21953 AL591742.1-201ENST00000604433 565 ntBASIC21.09■□□□□ 0.97
BCKDHBP21953 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.09■□□□□ 0.97
BCKDHBP21953 AP006294.2-201ENST00000641667 209 ntBASIC21.09■□□□□ 0.97
BCKDHBP21953 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BCKDHBP21953 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.09■□□□□ 0.97
BCKDHBP21953 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BCKDHBP21953 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
BCKDHBP21953 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
BCKDHBP21953 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
BCKDHBP21953 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
BCKDHBP21953 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
BCKDHBP21953 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.08■□□□□ 0.97
BCKDHBP21953 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.08■□□□□ 0.97
BCKDHBP21953 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.08■□□□□ 0.96
BCKDHBP21953 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
BCKDHBP21953 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
BCKDHBP21953 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BCKDHBP21953 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BCKDHBP21953 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.07■□□□□ 0.96
BCKDHBP21953 AL596275.1-201ENST00000423464 877 ntBASIC21.07■□□□□ 0.96
BCKDHBP21953 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BCKDHBP21953 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.07■□□□□ 0.96
BCKDHBP21953 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.07■□□□□ 0.96
BCKDHBP21953 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
BCKDHBP21953 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.06■□□□□ 0.96
BCKDHBP21953 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.06■□□□□ 0.96
BCKDHBP21953 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BCKDHBP21953 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BCKDHBP21953 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
BCKDHBP21953 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.06■□□□□ 0.96
BCKDHBP21953 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
BCKDHBP21953 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.06■□□□□ 0.96
BCKDHBP21953 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.06■□□□□ 0.96
BCKDHBP21953 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.06■□□□□ 0.96
BCKDHBP21953 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.06■□□□□ 0.96
BCKDHBP21953 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.06■□□□□ 0.96
BCKDHBP21953 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
BCKDHBP21953 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BCKDHBP21953 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BCKDHBP21953 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
BCKDHBP21953 KRT16P2-201ENST00000414673 1423 ntBASIC21.05■□□□□ 0.96
BCKDHBP21953 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BCKDHBP21953 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
BCKDHBP21953 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.05■□□□□ 0.96
BCKDHBP21953 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.05■□□□□ 0.96
BCKDHBP21953 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.05■□□□□ 0.96
BCKDHBP21953 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
BCKDHBP21953 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.05■□□□□ 0.96
BCKDHBP21953 AL162412.1-201ENST00000567129 965 ntBASIC21.05■□□□□ 0.96
BCKDHBP21953 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
BCKDHBP21953 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.05■□□□□ 0.96
BCKDHBP21953 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BCKDHBP21953 AC137767.1-201ENST00000602918 1920 ntBASIC21.05■□□□□ 0.96
BCKDHBP21953 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BCKDHBP21953 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
BCKDHBP21953 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BCKDHBP21953 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BCKDHBP21953 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BCKDHBP21953 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BCKDHBP21953 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.04■□□□□ 0.96
BCKDHBP21953 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BCKDHBP21953 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BCKDHBP21953 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BCKDHBP21953 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BCKDHBP21953 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms