Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF1BP20333 SLC47A1P1-202ENST00000449666 945 ntBASIC19.67■□□□□ 0.74
TNFRSF1BP20333 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
TNFRSF1BP20333 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TNFRSF1BP20333 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF1BP20333 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TNFRSF1BP20333 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.67■□□□□ 0.74
TNFRSF1BP20333 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TNFRSF1BP20333 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF1BP20333 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF1BP20333 SYT6-210ENST00000641643 1587 ntBASIC19.66■□□□□ 0.74
TNFRSF1BP20333 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.66■□□□□ 0.74
TNFRSF1BP20333 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.66■□□□□ 0.74
TNFRSF1BP20333 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF1BP20333 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF1BP20333 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.66■□□□□ 0.74
TNFRSF1BP20333 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF1BP20333 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TNFRSF1BP20333 AL356441.2-201ENST00000443009 864 ntBASIC19.66■□□□□ 0.74
TNFRSF1BP20333 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF1BP20333 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.66■□□□□ 0.74
TNFRSF1BP20333 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF1BP20333 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.66■□□□□ 0.74
TNFRSF1BP20333 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TNFRSF1BP20333 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF1BP20333 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF1BP20333 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.65■□□□□ 0.74
TNFRSF1BP20333 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.65■□□□□ 0.74
TNFRSF1BP20333 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF1BP20333 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF1BP20333 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF1BP20333 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF1BP20333 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.65■□□□□ 0.74
TNFRSF1BP20333 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.65■□□□□ 0.74
TNFRSF1BP20333 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF1BP20333 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF1BP20333 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF1BP20333 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF1BP20333 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF1BP20333 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF1BP20333 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.64■□□□□ 0.74
TNFRSF1BP20333 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TNFRSF1BP20333 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.64■□□□□ 0.74
TNFRSF1BP20333 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.64■□□□□ 0.74
TNFRSF1BP20333 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TNFRSF1BP20333 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF1BP20333 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF1BP20333 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.64■□□□□ 0.73
TNFRSF1BP20333 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.64■□□□□ 0.73
TNFRSF1BP20333 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF1BP20333 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF1BP20333 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
TNFRSF1BP20333 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF1BP20333 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF1BP20333 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF1BP20333 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TNFRSF1BP20333 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF1BP20333 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF1BP20333 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF1BP20333 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF1BP20333 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 LINC01006-201ENST00000333319 2292 ntBASIC19.63■□□□□ 0.73
TNFRSF1BP20333 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 AL049796.1-201ENST00000565336 1766 ntBASIC19.63■□□□□ 0.73
TNFRSF1BP20333 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TNFRSF1BP20333 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF1BP20333 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.62■□□□□ 0.73
TNFRSF1BP20333 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF1BP20333 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.62■□□□□ 0.73
TNFRSF1BP20333 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF1BP20333 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF1BP20333 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
TNFRSF1BP20333 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.62■□□□□ 0.73
TNFRSF1BP20333 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.62■□□□□ 0.73
TNFRSF1BP20333 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF1BP20333 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF1BP20333 AC136469.2-201ENST00000623944 1028 ntBASIC19.62■□□□□ 0.73
TNFRSF1BP20333 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TNFRSF1BP20333 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF1BP20333 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms