Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
UBL4AP11441 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.57■□□□□ 0.72
UBL4AP11441 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.57■□□□□ 0.72
UBL4AP11441 AC012414.1-201ENST00000556676 535 ntBASIC19.57■□□□□ 0.72
UBL4AP11441 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.57■□□□□ 0.72
UBL4AP11441 AC009237.3-201ENST00000393279 1427 ntBASIC19.57■□□□□ 0.72
UBL4AP11441 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBL4AP11441 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.57■□□□□ 0.72
UBL4AP11441 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBL4AP11441 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBL4AP11441 BX005040.4-201ENST00000637145 1518 ntBASIC19.56■□□□□ 0.72
UBL4AP11441 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBL4AP11441 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.56■□□□□ 0.72
UBL4AP11441 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
UBL4AP11441 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
UBL4AP11441 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.56■□□□□ 0.72
UBL4AP11441 AC104564.3-201ENST00000582367 638 ntBASIC19.56■□□□□ 0.72
UBL4AP11441 AL354811.1-201ENST00000610286 706 ntBASIC19.56■□□□□ 0.72
UBL4AP11441 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBL4AP11441 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
UBL4AP11441 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBL4AP11441 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBL4AP11441 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBL4AP11441 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
UBL4AP11441 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBL4AP11441 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.55■□□□□ 0.72
UBL4AP11441 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.55■□□□□ 0.72
UBL4AP11441 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBL4AP11441 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.55■□□□□ 0.72
UBL4AP11441 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBL4AP11441 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBL4AP11441 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBL4AP11441 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.55■□□□□ 0.72
UBL4AP11441 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.55■□□□□ 0.72
UBL4AP11441 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
UBL4AP11441 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.55■□□□□ 0.72
UBL4AP11441 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBL4AP11441 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBL4AP11441 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UBL4AP11441 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBL4AP11441 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UBL4AP11441 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBL4AP11441 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBL4AP11441 IRS3P-201ENST00000223076 1006 ntBASIC19.54■□□□□ 0.72
UBL4AP11441 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.54■□□□□ 0.72
UBL4AP11441 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBL4AP11441 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
UBL4AP11441 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.54■□□□□ 0.72
UBL4AP11441 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.54■□□□□ 0.72
UBL4AP11441 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.54■□□□□ 0.72
UBL4AP11441 AL358852.1-201ENST00000623174 1268 ntBASIC19.54■□□□□ 0.72
UBL4AP11441 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBL4AP11441 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBL4AP11441 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.54■□□□□ 0.72
UBL4AP11441 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
UBL4AP11441 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBL4AP11441 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UBL4AP11441 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.54■□□□□ 0.72
UBL4AP11441 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBL4AP11441 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.53■□□□□ 0.72
UBL4AP11441 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBL4AP11441 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBL4AP11441 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
UBL4AP11441 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBL4AP11441 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
UBL4AP11441 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBL4AP11441 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBL4AP11441 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.53■□□□□ 0.72
UBL4AP11441 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.53■□□□□ 0.72
UBL4AP11441 AC244015.2-201ENST00000616358 1861 ntBASIC19.53■□□□□ 0.72
UBL4AP11441 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.53■□□□□ 0.72
UBL4AP11441 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBL4AP11441 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
UBL4AP11441 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBL4AP11441 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBL4AP11441 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.53■□□□□ 0.72
UBL4AP11441 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.52■□□□□ 0.72
UBL4AP11441 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
UBL4AP11441 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBL4AP11441 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBL4AP11441 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.52■□□□□ 0.72
UBL4AP11441 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.52■□□□□ 0.72
UBL4AP11441 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBL4AP11441 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.52■□□□□ 0.72
UBL4AP11441 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBL4AP11441 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBL4AP11441 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBL4AP11441 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
UBL4AP11441 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.52■□□□□ 0.72
UBL4AP11441 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
UBL4AP11441 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBL4AP11441 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBL4AP11441 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.52■□□□□ 0.72
UBL4AP11441 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBL4AP11441 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
UBL4AP11441 AC003102.1-202ENST00000563394 1796 ntBASIC19.52■□□□□ 0.71
UBL4AP11441 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.52■□□□□ 0.71
UBL4AP11441 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
UBL4AP11441 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBL4AP11441 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms