Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.01■□□□□ 0.47
ZNF728P0DKX0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF728P0DKX0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ZNF728P0DKX0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ZNF728P0DKX0 Z98882.1-201ENST00000622160 2253 ntBASIC18.01■□□□□ 0.47
ZNF728P0DKX0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF728P0DKX0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ZNF728P0DKX0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF728P0DKX0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18■□□□□ 0.47
ZNF728P0DKX0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ZNF728P0DKX0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZNF728P0DKX0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18■□□□□ 0.47
ZNF728P0DKX0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF728P0DKX0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
ZNF728P0DKX0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ZNF728P0DKX0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ZNF728P0DKX0 AC027682.1-201ENST00000562846 899 ntBASIC18■□□□□ 0.47
ZNF728P0DKX0 AC008764.7-201ENST00000593779 1081 ntBASIC18■□□□□ 0.47
ZNF728P0DKX0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18■□□□□ 0.47
ZNF728P0DKX0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18■□□□□ 0.47
ZNF728P0DKX0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF728P0DKX0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF728P0DKX0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18■□□□□ 0.47
ZNF728P0DKX0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18■□□□□ 0.47
ZNF728P0DKX0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
ZNF728P0DKX0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ZNF728P0DKX0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
ZNF728P0DKX0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18■□□□□ 0.47
ZNF728P0DKX0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18■□□□□ 0.47
ZNF728P0DKX0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF728P0DKX0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF728P0DKX0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF728P0DKX0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ZNF728P0DKX0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.99■□□□□ 0.47
ZNF728P0DKX0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF728P0DKX0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ZNF728P0DKX0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
ZNF728P0DKX0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ZNF728P0DKX0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ZNF728P0DKX0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.99■□□□□ 0.47
ZNF728P0DKX0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.99■□□□□ 0.47
ZNF728P0DKX0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ZNF728P0DKX0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF728P0DKX0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.99■□□□□ 0.47
ZNF728P0DKX0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF728P0DKX0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF728P0DKX0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ZNF728P0DKX0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF728P0DKX0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF728P0DKX0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.98■□□□□ 0.47
ZNF728P0DKX0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF728P0DKX0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
ZNF728P0DKX0 AP001330.3-201ENST00000520123 633 ntBASIC17.98■□□□□ 0.47
ZNF728P0DKX0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.98■□□□□ 0.47
ZNF728P0DKX0 AC126544.1-201ENST00000580842 1059 ntBASIC17.98■□□□□ 0.47
ZNF728P0DKX0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.98■□□□□ 0.47
ZNF728P0DKX0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF728P0DKX0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF728P0DKX0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.98■□□□□ 0.47
ZNF728P0DKX0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF728P0DKX0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF728P0DKX0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF728P0DKX0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
ZNF728P0DKX0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
ZNF728P0DKX0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF728P0DKX0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF728P0DKX0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF728P0DKX0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF728P0DKX0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF728P0DKX0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
ZNF728P0DKX0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF728P0DKX0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF728P0DKX0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF728P0DKX0 AC099791.1-201ENST00000416440 715 ntBASIC17.97■□□□□ 0.47
ZNF728P0DKX0 AC010141.3-201ENST00000456659 717 ntBASIC17.97■□□□□ 0.47
ZNF728P0DKX0 AF213884.3-201ENST00000563833 479 ntBASIC17.97■□□□□ 0.47
ZNF728P0DKX0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF728P0DKX0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF728P0DKX0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF728P0DKX0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ZNF728P0DKX0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ZNF728P0DKX0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF728P0DKX0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.97■□□□□ 0.47
ZNF728P0DKX0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF728P0DKX0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ZNF728P0DKX0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF728P0DKX0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF728P0DKX0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNF728P0DKX0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF728P0DKX0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF728P0DKX0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF728P0DKX0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF728P0DKX0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF728P0DKX0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF728P0DKX0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF728P0DKX0 MIR939-201ENST00000401314 82 ntBASIC17.96■□□□□ 0.47
ZNF728P0DKX0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ZNF728P0DKX0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNF728P0DKX0 AL031432.3-201ENST00000607698 485 ntBASIC17.96■□□□□ 0.47
ZNF728P0DKX0 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms