Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.28■■□□□ 1.32
TPM1P09493 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.28■■□□□ 1.32
TPM1P09493 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.28■■□□□ 1.32
TPM1P09493 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.28■■□□□ 1.32
TPM1P09493 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TPM1P09493 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TPM1P09493 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TPM1P09493 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
TPM1P09493 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.27■■□□□ 1.32
TPM1P09493 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TPM1P09493 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TPM1P09493 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.27■■□□□ 1.32
TPM1P09493 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TPM1P09493 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.27■■□□□ 1.32
TPM1P09493 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TPM1P09493 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
TPM1P09493 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TPM1P09493 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TPM1P09493 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
TPM1P09493 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
TPM1P09493 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TPM1P09493 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TPM1P09493 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TPM1P09493 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TPM1P09493 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TPM1P09493 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.31
TPM1P09493 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TPM1P09493 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TPM1P09493 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.26■■□□□ 1.31
TPM1P09493 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TPM1P09493 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
TPM1P09493 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TPM1P09493 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
TPM1P09493 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.26■■□□□ 1.31
TPM1P09493 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TPM1P09493 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
TPM1P09493 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TPM1P09493 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TPM1P09493 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TPM1P09493 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TPM1P09493 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC23.25■■□□□ 1.31
TPM1P09493 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TPM1P09493 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.25■■□□□ 1.31
TPM1P09493 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TPM1P09493 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
TPM1P09493 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TPM1P09493 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.25■■□□□ 1.31
TPM1P09493 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TPM1P09493 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TPM1P09493 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TPM1P09493 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TPM1P09493 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TPM1P09493 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TPM1P09493 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.24■■□□□ 1.31
TPM1P09493 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
TPM1P09493 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TPM1P09493 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
TPM1P09493 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TPM1P09493 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.24■■□□□ 1.31
TPM1P09493 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TPM1P09493 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.24■■□□□ 1.31
TPM1P09493 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
TPM1P09493 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.24■■□□□ 1.31
TPM1P09493 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TPM1P09493 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TPM1P09493 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.23■■□□□ 1.31
TPM1P09493 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TPM1P09493 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.23■■□□□ 1.31
TPM1P09493 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.23■■□□□ 1.31
TPM1P09493 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.23■■□□□ 1.31
TPM1P09493 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
TPM1P09493 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TPM1P09493 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TPM1P09493 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TPM1P09493 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.23■■□□□ 1.31
TPM1P09493 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TPM1P09493 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TPM1P09493 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TPM1P09493 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
TPM1P09493 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.22■■□□□ 1.31
TPM1P09493 AC006455.2-201ENST00000429931 906 ntBASIC23.22■■□□□ 1.31
TPM1P09493 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.22■■□□□ 1.31
TPM1P09493 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.22■■□□□ 1.31
TPM1P09493 AL034346.1-201ENST00000568244 1277 ntBASIC23.22■■□□□ 1.31
TPM1P09493 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TPM1P09493 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.22■■□□□ 1.31
TPM1P09493 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TPM1P09493 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.22■■□□□ 1.31
TPM1P09493 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TPM1P09493 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TPM1P09493 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TPM1P09493 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.21■■□□□ 1.31
TPM1P09493 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TPM1P09493 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.21■■□□□ 1.31
TPM1P09493 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.21■■□□□ 1.31
TPM1P09493 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TPM1P09493 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
TPM1P09493 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.21■■□□□ 1.31
TPM1P09493 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.21■■□□□ 1.31
TPM1P09493 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms