Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TPM3P06753 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.71■■□□□ 1.39
TPM3P06753 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
TPM3P06753 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.7■■□□□ 1.39
TPM3P06753 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TPM3P06753 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
TPM3P06753 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.39
TPM3P06753 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
TPM3P06753 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TPM3P06753 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TPM3P06753 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TPM3P06753 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
TPM3P06753 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TPM3P06753 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC23.7■■□□□ 1.38
TPM3P06753 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TPM3P06753 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TPM3P06753 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TPM3P06753 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
TPM3P06753 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TPM3P06753 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.69■■□□□ 1.38
TPM3P06753 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TPM3P06753 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
TPM3P06753 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.69■■□□□ 1.38
TPM3P06753 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TPM3P06753 KRT125P-201ENST00000546827 989 ntBASIC23.69■■□□□ 1.38
TPM3P06753 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.69■■□□□ 1.38
TPM3P06753 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
TPM3P06753 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.69■■□□□ 1.38
TPM3P06753 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.69■■□□□ 1.38
TPM3P06753 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TPM3P06753 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.69■■□□□ 1.38
TPM3P06753 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TPM3P06753 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TPM3P06753 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
TPM3P06753 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
TPM3P06753 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TPM3P06753 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TPM3P06753 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TPM3P06753 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TPM3P06753 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TPM3P06753 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TPM3P06753 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TPM3P06753 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TPM3P06753 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC23.68■■□□□ 1.38
TPM3P06753 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TPM3P06753 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TPM3P06753 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TPM3P06753 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TPM3P06753 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
TPM3P06753 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
TPM3P06753 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TPM3P06753 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
TPM3P06753 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
TPM3P06753 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TPM3P06753 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.67■■□□□ 1.38
TPM3P06753 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TPM3P06753 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TPM3P06753 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.67■■□□□ 1.38
TPM3P06753 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.67■■□□□ 1.38
TPM3P06753 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TPM3P06753 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TPM3P06753 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TPM3P06753 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.67■■□□□ 1.38
TPM3P06753 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TPM3P06753 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.67■■□□□ 1.38
TPM3P06753 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TPM3P06753 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TPM3P06753 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TPM3P06753 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TPM3P06753 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TPM3P06753 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TPM3P06753 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
TPM3P06753 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
TPM3P06753 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TPM3P06753 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TPM3P06753 AC079089.2-201ENST00000531211 1277 ntBASIC23.66■■□□□ 1.38
TPM3P06753 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TPM3P06753 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TPM3P06753 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC23.66■■□□□ 1.38
TPM3P06753 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.66■■□□□ 1.38
TPM3P06753 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.66■■□□□ 1.38
TPM3P06753 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TPM3P06753 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.66■■□□□ 1.38
TPM3P06753 GABARAPL3-202ENST00000624044 1851 ntBASIC23.66■■□□□ 1.38
TPM3P06753 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TPM3P06753 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TPM3P06753 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
TPM3P06753 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.66■■□□□ 1.38
TPM3P06753 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
TPM3P06753 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
TPM3P06753 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
TPM3P06753 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.65■■□□□ 1.38
TPM3P06753 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
TPM3P06753 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TPM3P06753 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
TPM3P06753 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TPM3P06753 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TPM3P06753 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.65■■□□□ 1.38
TPM3P06753 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
TPM3P06753 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms