Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MT-ND3P03897 MIR939-201ENST00000401314 82 ntBASIC21.53■■□□□ 1.04
MT-ND3P03897 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.53■■□□□ 1.04
MT-ND3P03897 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MT-ND3P03897 AC091305.1-201ENST00000479476 895 ntBASIC21.53■■□□□ 1.04
MT-ND3P03897 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.53■■□□□ 1.04
MT-ND3P03897 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MT-ND3P03897 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.53■■□□□ 1.04
MT-ND3P03897 AF213884.3-201ENST00000563833 479 ntBASIC21.53■■□□□ 1.04
MT-ND3P03897 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
MT-ND3P03897 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
MT-ND3P03897 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MT-ND3P03897 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
MT-ND3P03897 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MT-ND3P03897 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MT-ND3P03897 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MT-ND3P03897 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
MT-ND3P03897 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
MT-ND3P03897 SERBP1P1-201ENST00000396021 1160 ntBASIC21.52■■□□□ 1.04
MT-ND3P03897 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.52■■□□□ 1.04
MT-ND3P03897 AC104564.3-201ENST00000582367 638 ntBASIC21.52■■□□□ 1.04
MT-ND3P03897 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
MT-ND3P03897 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.52■■□□□ 1.04
MT-ND3P03897 AC026471.6-201ENST00000622954 1905 ntBASIC21.52■■□□□ 1.04
MT-ND3P03897 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MT-ND3P03897 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
MT-ND3P03897 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
MT-ND3P03897 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MT-ND3P03897 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
MT-ND3P03897 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MT-ND3P03897 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MT-ND3P03897 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MT-ND3P03897 AP001330.3-201ENST00000520123 633 ntBASIC21.51■■□□□ 1.03
MT-ND3P03897 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.51■■□□□ 1.03
MT-ND3P03897 MIR4767-201ENST00000582827 78 ntBASIC21.51■■□□□ 1.03
MT-ND3P03897 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
MT-ND3P03897 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
MT-ND3P03897 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
MT-ND3P03897 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.51■■□□□ 1.03
MT-ND3P03897 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
MT-ND3P03897 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
MT-ND3P03897 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.5■■□□□ 1.03
MT-ND3P03897 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
MT-ND3P03897 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.5■■□□□ 1.03
MT-ND3P03897 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.5■■□□□ 1.03
MT-ND3P03897 AC105265.2-201ENST00000467189 838 ntBASIC21.5■■□□□ 1.03
MT-ND3P03897 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.5■■□□□ 1.03
MT-ND3P03897 RARRES2P6-201ENST00000567333 442 ntBASIC21.5■■□□□ 1.03
MT-ND3P03897 AL031602.1-201ENST00000633169 911 ntBASIC21.5■■□□□ 1.03
MT-ND3P03897 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
MT-ND3P03897 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MT-ND3P03897 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MT-ND3P03897 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
MT-ND3P03897 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
MT-ND3P03897 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MT-ND3P03897 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MT-ND3P03897 OR7E47P-201ENST00000546390 1422 ntBASIC21.49■■□□□ 1.03
MT-ND3P03897 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MT-ND3P03897 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.49■■□□□ 1.03
MT-ND3P03897 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
MT-ND3P03897 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MT-ND3P03897 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MT-ND3P03897 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.49■■□□□ 1.03
MT-ND3P03897 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.49■■□□□ 1.03
MT-ND3P03897 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
MT-ND3P03897 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.49■■□□□ 1.03
MT-ND3P03897 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
MT-ND3P03897 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.49■■□□□ 1.03
MT-ND3P03897 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
MT-ND3P03897 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.49■■□□□ 1.03
MT-ND3P03897 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.48■■□□□ 1.03
MT-ND3P03897 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MT-ND3P03897 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MT-ND3P03897 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MT-ND3P03897 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MT-ND3P03897 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MT-ND3P03897 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MT-ND3P03897 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MT-ND3P03897 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.48■■□□□ 1.03
MT-ND3P03897 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.48■■□□□ 1.03
MT-ND3P03897 AC027682.1-201ENST00000562846 899 ntBASIC21.48■■□□□ 1.03
MT-ND3P03897 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
MT-ND3P03897 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
MT-ND3P03897 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
MT-ND3P03897 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
MT-ND3P03897 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MT-ND3P03897 RASA4CP-201ENST00000424092 1398 ntBASIC21.48■■□□□ 1.03
MT-ND3P03897 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MT-ND3P03897 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MT-ND3P03897 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
MT-ND3P03897 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MT-ND3P03897 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MT-ND3P03897 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.47■■□□□ 1.03
MT-ND3P03897 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.47■■□□□ 1.03
MT-ND3P03897 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MT-ND3P03897 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.47■■□□□ 1.03
MT-ND3P03897 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.47■■□□□ 1.03
MT-ND3P03897 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.47■■□□□ 1.03
MT-ND3P03897 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MT-ND3P03897 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms