Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.39■□□□□ 0.53
NGFP01138 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NGFP01138 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NGFP01138 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
NGFP01138 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NGFP01138 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NGFP01138 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NGFP01138 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
NGFP01138 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NGFP01138 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
NGFP01138 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NGFP01138 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NGFP01138 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NGFP01138 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.38■□□□□ 0.53
NGFP01138 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NGFP01138 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NGFP01138 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NGFP01138 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NGFP01138 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
NGFP01138 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.38■□□□□ 0.53
NGFP01138 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.38■□□□□ 0.53
NGFP01138 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.38■□□□□ 0.53
NGFP01138 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NGFP01138 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.38■□□□□ 0.53
NGFP01138 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NGFP01138 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NGFP01138 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NGFP01138 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NGFP01138 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.38■□□□□ 0.53
NGFP01138 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NGFP01138 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NGFP01138 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NGFP01138 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NGFP01138 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NGFP01138 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NGFP01138 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NGFP01138 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NGFP01138 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
NGFP01138 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NGFP01138 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NGFP01138 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NGFP01138 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NGFP01138 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NGFP01138 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.37■□□□□ 0.53
NGFP01138 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.37■□□□□ 0.53
NGFP01138 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NGFP01138 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.37■□□□□ 0.53
NGFP01138 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.37■□□□□ 0.53
NGFP01138 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NGFP01138 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NGFP01138 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NGFP01138 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.37■□□□□ 0.53
NGFP01138 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NGFP01138 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.37■□□□□ 0.53
NGFP01138 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NGFP01138 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NGFP01138 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NGFP01138 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NGFP01138 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NGFP01138 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NGFP01138 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NGFP01138 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NGFP01138 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NGFP01138 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.36■□□□□ 0.53
NGFP01138 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.36■□□□□ 0.53
NGFP01138 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.36■□□□□ 0.53
NGFP01138 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.36■□□□□ 0.53
NGFP01138 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.36■□□□□ 0.53
NGFP01138 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.36■□□□□ 0.53
NGFP01138 CCDC92B-201ENST00000575506 885 ntBASIC18.36■□□□□ 0.53
NGFP01138 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NGFP01138 TERF1P2-201ENST00000583350 1212 ntBASIC18.36■□□□□ 0.53
NGFP01138 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NGFP01138 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NGFP01138 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NGFP01138 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.35■□□□□ 0.53
NGFP01138 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.35■□□□□ 0.53
NGFP01138 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NGFP01138 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.35■□□□□ 0.53
NGFP01138 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NGFP01138 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NGFP01138 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.35■□□□□ 0.53
NGFP01138 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.35■□□□□ 0.53
NGFP01138 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NGFP01138 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NGFP01138 AC104564.3-201ENST00000582367 638 ntBASIC18.35■□□□□ 0.53
NGFP01138 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NGFP01138 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NGFP01138 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NGFP01138 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NGFP01138 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NGFP01138 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NGFP01138 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
NGFP01138 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NGFP01138 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NGFP01138 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.34■□□□□ 0.53
NGFP01138 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NGFP01138 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NGFP01138 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NGFP01138 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms