Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PGK1P00558 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PGK1P00558 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PGK1P00558 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.76■■□□□ 1.39
PGK1P00558 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PGK1P00558 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.76■■□□□ 1.39
PGK1P00558 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.76■■□□□ 1.39
PGK1P00558 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PGK1P00558 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PGK1P00558 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.76■■□□□ 1.39
PGK1P00558 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.76■■□□□ 1.39
PGK1P00558 AC006058.3-201ENST00000606217 1069 ntBASIC23.76■■□□□ 1.39
PGK1P00558 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.76■■□□□ 1.39
PGK1P00558 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PGK1P00558 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.76■■□□□ 1.39
PGK1P00558 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
PGK1P00558 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.76■■□□□ 1.39
PGK1P00558 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PGK1P00558 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PGK1P00558 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PGK1P00558 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PGK1P00558 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.75■■□□□ 1.39
PGK1P00558 AL158047.1-201ENST00000445918 881 ntBASIC23.75■■□□□ 1.39
PGK1P00558 AP006294.2-201ENST00000641667 209 ntBASIC23.75■■□□□ 1.39
PGK1P00558 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PGK1P00558 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PGK1P00558 RBM17P2-201ENST00000616397 1405 ntBASIC23.75■■□□□ 1.39
PGK1P00558 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PGK1P00558 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
PGK1P00558 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.74■■□□□ 1.39
PGK1P00558 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PGK1P00558 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
PGK1P00558 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
PGK1P00558 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.74■■□□□ 1.39
PGK1P00558 POU5F1P4-201ENST00000413175 1085 ntBASIC23.74■■□□□ 1.39
PGK1P00558 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.74■■□□□ 1.39
PGK1P00558 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.74■■□□□ 1.39
PGK1P00558 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
PGK1P00558 AL591742.1-201ENST00000604433 565 ntBASIC23.74■■□□□ 1.39
PGK1P00558 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PGK1P00558 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.74■■□□□ 1.39
PGK1P00558 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PGK1P00558 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PGK1P00558 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.73■■□□□ 1.39
PGK1P00558 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PGK1P00558 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
PGK1P00558 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PGK1P00558 AC128676.1-201ENST00000454392 318 ntBASIC23.73■■□□□ 1.39
PGK1P00558 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.73■■□□□ 1.39
PGK1P00558 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
PGK1P00558 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.73■■□□□ 1.39
PGK1P00558 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
PGK1P00558 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PGK1P00558 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.73■■□□□ 1.39
PGK1P00558 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
PGK1P00558 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.73■■□□□ 1.39
PGK1P00558 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.73■■□□□ 1.39
PGK1P00558 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PGK1P00558 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PGK1P00558 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PGK1P00558 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PGK1P00558 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.72■■□□□ 1.39
PGK1P00558 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PGK1P00558 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PGK1P00558 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.72■■□□□ 1.39
PGK1P00558 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.72■■□□□ 1.39
PGK1P00558 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.72■■□□□ 1.39
PGK1P00558 AC142381.4-202ENST00000563973 229 ntBASIC23.72■■□□□ 1.39
PGK1P00558 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.72■■□□□ 1.39
PGK1P00558 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.72■■□□□ 1.39
PGK1P00558 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.72■■□□□ 1.39
PGK1P00558 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.72■■□□□ 1.39
PGK1P00558 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PGK1P00558 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PGK1P00558 AC137767.1-201ENST00000602918 1920 ntBASIC23.71■■□□□ 1.39
PGK1P00558 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.71■■□□□ 1.39
PGK1P00558 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PGK1P00558 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PGK1P00558 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.71■■□□□ 1.39
PGK1P00558 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.71■■□□□ 1.39
PGK1P00558 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
PGK1P00558 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PGK1P00558 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
PGK1P00558 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.7■■□□□ 1.38
PGK1P00558 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PGK1P00558 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PGK1P00558 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.7■■□□□ 1.38
PGK1P00558 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.7■■□□□ 1.38
PGK1P00558 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.7■■□□□ 1.38
PGK1P00558 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.7■■□□□ 1.38
PGK1P00558 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.7■■□□□ 1.38
PGK1P00558 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PGK1P00558 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.7■■□□□ 1.38
PGK1P00558 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PGK1P00558 KRT16P2-201ENST00000414673 1423 ntBASIC23.69■■□□□ 1.38
PGK1P00558 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
PGK1P00558 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PGK1P00558 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.69■■□□□ 1.38
PGK1P00558 AL596275.1-201ENST00000423464 877 ntBASIC23.69■■□□□ 1.38
PGK1P00558 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms