Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-2O95096 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.63■□□□□ 0.73
NKX2-2O95096 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-2O95096 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-2O95096 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-2O95096 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-2O95096 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-2O95096 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-2O95096 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-2O95096 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-2O95096 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-2O95096 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-2O95096 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-2O95096 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-2O95096 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
NKX2-2O95096 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
NKX2-2O95096 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-2O95096 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
NKX2-2O95096 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NKX2-2O95096 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-2O95096 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
NKX2-2O95096 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NKX2-2O95096 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-2O95096 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-2O95096 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
NKX2-2O95096 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-2O95096 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-2O95096 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-2O95096 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-2O95096 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-2O95096 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-2O95096 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.61■□□□□ 0.73
NKX2-2O95096 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.61■□□□□ 0.73
NKX2-2O95096 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
NKX2-2O95096 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.61■□□□□ 0.73
NKX2-2O95096 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NKX2-2O95096 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-2O95096 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-2O95096 AC123595.1-201ENST00000440769 1046 ntBASIC19.61■□□□□ 0.73
NKX2-2O95096 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.61■□□□□ 0.73
NKX2-2O95096 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.61■□□□□ 0.73
NKX2-2O95096 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.61■□□□□ 0.73
NKX2-2O95096 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-2O95096 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-2O95096 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NKX2-2O95096 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-2O95096 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.61■□□□□ 0.73
NKX2-2O95096 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-2O95096 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.6■□□□□ 0.73
NKX2-2O95096 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-2O95096 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.6■□□□□ 0.73
NKX2-2O95096 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-2O95096 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-2O95096 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-2O95096 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-2O95096 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.6■□□□□ 0.73
NKX2-2O95096 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-2O95096 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NKX2-2O95096 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-2O95096 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-2O95096 LINC02228-203ENST00000641970 1355 ntBASIC19.59■□□□□ 0.73
NKX2-2O95096 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-2O95096 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.59■□□□□ 0.73
NKX2-2O95096 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-2O95096 YBX1P1-201ENST00000445822 960 ntBASIC19.59■□□□□ 0.73
NKX2-2O95096 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.59■□□□□ 0.73
NKX2-2O95096 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-2O95096 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NKX2-2O95096 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NKX2-2O95096 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NKX2-2O95096 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NKX2-2O95096 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
NKX2-2O95096 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.58■□□□□ 0.73
NKX2-2O95096 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.58■□□□□ 0.73
NKX2-2O95096 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.58■□□□□ 0.73
NKX2-2O95096 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NKX2-2O95096 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NKX2-2O95096 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.58■□□□□ 0.72
NKX2-2O95096 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.58■□□□□ 0.72
NKX2-2O95096 EEF1DP3-203ENST00000566025 782 ntBASIC19.58■□□□□ 0.72
NKX2-2O95096 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.58■□□□□ 0.72
NKX2-2O95096 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NKX2-2O95096 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NKX2-2O95096 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NKX2-2O95096 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NKX2-2O95096 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
NKX2-2O95096 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.57■□□□□ 0.72
NKX2-2O95096 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-2O95096 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.57■□□□□ 0.72
NKX2-2O95096 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.57■□□□□ 0.72
NKX2-2O95096 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-2O95096 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-2O95096 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-2O95096 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NKX2-2O95096 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.57■□□□□ 0.72
NKX2-2O95096 AC079140.4-201ENST00000507448 529 ntBASIC19.57■□□□□ 0.72
NKX2-2O95096 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.57■□□□□ 0.72
NKX2-2O95096 AC053503.5-201ENST00000601508 636 ntBASIC19.57■□□□□ 0.72
NKX2-2O95096 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.57■□□□□ 0.72
NKX2-2O95096 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms