Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
KDM4BO94953 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KDM4BO94953 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KDM4BO94953 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.52■□□□□ 0.56
KDM4BO94953 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
KDM4BO94953 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KDM4BO94953 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.52■□□□□ 0.56
KDM4BO94953 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KDM4BO94953 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.52■□□□□ 0.56
KDM4BO94953 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KDM4BO94953 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KDM4BO94953 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KDM4BO94953 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDM4BO94953 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDM4BO94953 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDM4BO94953 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDM4BO94953 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
KDM4BO94953 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KDM4BO94953 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
KDM4BO94953 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.51■□□□□ 0.55
KDM4BO94953 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDM4BO94953 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.51■□□□□ 0.55
KDM4BO94953 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.51■□□□□ 0.55
KDM4BO94953 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.51■□□□□ 0.55
KDM4BO94953 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.51■□□□□ 0.55
KDM4BO94953 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
KDM4BO94953 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KDM4BO94953 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
KDM4BO94953 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.51■□□□□ 0.55
KDM4BO94953 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
KDM4BO94953 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
KDM4BO94953 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.51■□□□□ 0.55
KDM4BO94953 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDM4BO94953 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDM4BO94953 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.51■□□□□ 0.55
KDM4BO94953 AC133637.1-201ENST00000624115 1537 ntBASIC18.5■□□□□ 0.55
KDM4BO94953 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.5■□□□□ 0.55
KDM4BO94953 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDM4BO94953 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDM4BO94953 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
KDM4BO94953 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDM4BO94953 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KDM4BO94953 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
KDM4BO94953 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
KDM4BO94953 AC006455.2-201ENST00000429931 906 ntBASIC18.5■□□□□ 0.55
KDM4BO94953 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.5■□□□□ 0.55
KDM4BO94953 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
KDM4BO94953 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.5■□□□□ 0.55
KDM4BO94953 pRNA.6-201ENST00000610482 90 ntBASIC18.5■□□□□ 0.55
KDM4BO94953 pRNA.5-201ENST00000612139 90 ntBASIC18.5■□□□□ 0.55
KDM4BO94953 pRNA.11-201ENST00000618423 90 ntBASIC18.5■□□□□ 0.55
KDM4BO94953 pRNA.13-201ENST00000619112 90 ntBASIC18.5■□□□□ 0.55
KDM4BO94953 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.5■□□□□ 0.55
KDM4BO94953 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDM4BO94953 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDM4BO94953 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.5■□□□□ 0.55
KDM4BO94953 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
KDM4BO94953 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.5■□□□□ 0.55
KDM4BO94953 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.5■□□□□ 0.55
KDM4BO94953 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
KDM4BO94953 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDM4BO94953 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDM4BO94953 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.5■□□□□ 0.55
KDM4BO94953 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KDM4BO94953 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KDM4BO94953 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
KDM4BO94953 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KDM4BO94953 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.49■□□□□ 0.55
KDM4BO94953 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
KDM4BO94953 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
KDM4BO94953 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KDM4BO94953 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
KDM4BO94953 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KDM4BO94953 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KDM4BO94953 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
KDM4BO94953 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
KDM4BO94953 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.49■□□□□ 0.55
KDM4BO94953 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.49■□□□□ 0.55
KDM4BO94953 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.49■□□□□ 0.55
KDM4BO94953 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.49■□□□□ 0.55
KDM4BO94953 AC099791.2-201ENST00000605725 427 ntBASIC18.49■□□□□ 0.55
KDM4BO94953 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KDM4BO94953 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KDM4BO94953 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KDM4BO94953 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
KDM4BO94953 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
KDM4BO94953 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
KDM4BO94953 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.48■□□□□ 0.55
KDM4BO94953 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
KDM4BO94953 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
KDM4BO94953 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.48■□□□□ 0.55
KDM4BO94953 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.48■□□□□ 0.55
KDM4BO94953 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KDM4BO94953 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
KDM4BO94953 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
KDM4BO94953 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.48■□□□□ 0.55
KDM4BO94953 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
KDM4BO94953 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KDM4BO94953 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
KDM4BO94953 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms