Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC33.38■■■□□ 2.93
PCF11O94913 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC33.38■■■□□ 2.93
PCF11O94913 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
PCF11O94913 AC003102.1-202ENST00000563394 1796 ntBASIC33.37■■■□□ 2.93
PCF11O94913 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
PCF11O94913 AC061975.6-201ENST00000579045 1553 ntBASIC33.37■■■□□ 2.93
PCF11O94913 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC33.37■■■□□ 2.93
PCF11O94913 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
PCF11O94913 FAM201B-201ENST00000458407 597 ntBASIC33.37■■■□□ 2.93
PCF11O94913 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC33.37■■■□□ 2.93
PCF11O94913 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC33.37■■■□□ 2.93
PCF11O94913 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
PCF11O94913 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
PCF11O94913 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
PCF11O94913 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC33.36■■■□□ 2.93
PCF11O94913 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
PCF11O94913 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC33.36■■■□□ 2.93
PCF11O94913 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC33.36■■■□□ 2.93
PCF11O94913 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
PCF11O94913 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
PCF11O94913 AC026471.6-201ENST00000622954 1905 ntBASIC33.36■■■□□ 2.93
PCF11O94913 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC33.35■■■□□ 2.93
PCF11O94913 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
PCF11O94913 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
PCF11O94913 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
PCF11O94913 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
PCF11O94913 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
PCF11O94913 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC33.35■■■□□ 2.93
PCF11O94913 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC33.35■■■□□ 2.93
PCF11O94913 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
PCF11O94913 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC33.35■■■□□ 2.93
PCF11O94913 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC33.35■■■□□ 2.93
PCF11O94913 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC33.34■■■□□ 2.93
PCF11O94913 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
PCF11O94913 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC33.34■■■□□ 2.93
PCF11O94913 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
PCF11O94913 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
PCF11O94913 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC33.34■■■□□ 2.93
PCF11O94913 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC33.34■■■□□ 2.93
PCF11O94913 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC33.34■■■□□ 2.93
PCF11O94913 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC33.34■■■□□ 2.93
PCF11O94913 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC33.34■■■□□ 2.93
PCF11O94913 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
PCF11O94913 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC33.34■■■□□ 2.93
PCF11O94913 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC33.34■■■□□ 2.93
PCF11O94913 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
PCF11O94913 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
PCF11O94913 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
PCF11O94913 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
PCF11O94913 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
PCF11O94913 BET1L-204ENST00000410108 637 ntTSL 3 BASIC33.33■■■□□ 2.93
PCF11O94913 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC33.33■■■□□ 2.93
PCF11O94913 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC33.33■■■□□ 2.93
PCF11O94913 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC33.33■■■□□ 2.93
PCF11O94913 PFKL-212ENST00000628044 129 ntTSL 3 BASIC33.33■■■□□ 2.93
PCF11O94913 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC33.33■■■□□ 2.93
PCF11O94913 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC33.33■■■□□ 2.93
PCF11O94913 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC33.32■■■□□ 2.93
PCF11O94913 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC33.32■■■□□ 2.93
PCF11O94913 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC33.32■■■□□ 2.92
PCF11O94913 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC33.32■■■□□ 2.92
PCF11O94913 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC33.32■■■□□ 2.92
PCF11O94913 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
PCF11O94913 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC33.32■■■□□ 2.92
PCF11O94913 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC33.31■■■□□ 2.92
PCF11O94913 MKRN4P-201ENST00000444706 1521 ntBASIC33.31■■■□□ 2.92
PCF11O94913 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
PCF11O94913 AC073210.2-201ENST00000430369 194 ntBASIC33.31■■■□□ 2.92
PCF11O94913 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC33.31■■■□□ 2.92
PCF11O94913 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC33.31■■■□□ 2.92
PCF11O94913 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC33.31■■■□□ 2.92
PCF11O94913 CBFB-203ENST00000561924 584 ntTSL 5 BASIC33.31■■■□□ 2.92
PCF11O94913 C1orf229-201ENST00000623686 2258 ntBASIC33.31■■■□□ 2.92
PCF11O94913 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC33.31■■■□□ 2.92
PCF11O94913 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC33.31■■■□□ 2.92
PCF11O94913 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC33.31■■■□□ 2.92
PCF11O94913 RARG-204ENST00000543726 1779 ntTSL 2 BASIC33.31■■■□□ 2.92
PCF11O94913 AC008175.2-201ENST00000612840 297 ntBASIC33.3■■■□□ 2.92
PCF11O94913 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC33.3■■■□□ 2.92
PCF11O94913 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
PCF11O94913 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
PCF11O94913 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC33.3■■■□□ 2.92
PCF11O94913 AC083880.1-201ENST00000608266 535 ntBASIC33.3■■■□□ 2.92
PCF11O94913 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
PCF11O94913 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
PCF11O94913 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
PCF11O94913 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC33.29■■■□□ 2.92
PCF11O94913 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC33.29■■■□□ 2.92
PCF11O94913 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC33.29■■■□□ 2.92
PCF11O94913 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC33.29■■■□□ 2.92
PCF11O94913 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC33.29■■■□□ 2.92
PCF11O94913 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC33.28■■■□□ 2.92
PCF11O94913 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
PCF11O94913 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC33.28■■■□□ 2.92
PCF11O94913 POU5F1P4-201ENST00000413175 1085 ntBASIC33.28■■■□□ 2.92
PCF11O94913 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC33.28■■■□□ 2.92
PCF11O94913 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC33.27■■■□□ 2.92
PCF11O94913 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC33.27■■■□□ 2.92
PCF11O94913 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
PCF11O94913 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms