Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NDUFS3O75489 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.14■□□□□ 0.97
NDUFS3O75489 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.14■□□□□ 0.97
NDUFS3O75489 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NDUFS3O75489 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.14■□□□□ 0.97
NDUFS3O75489 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.14■□□□□ 0.97
NDUFS3O75489 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NDUFS3O75489 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.13■□□□□ 0.97
NDUFS3O75489 Z98882.1-201ENST00000622160 2253 ntBASIC21.13■□□□□ 0.97
NDUFS3O75489 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.13■□□□□ 0.97
NDUFS3O75489 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NDUFS3O75489 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
NDUFS3O75489 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
NDUFS3O75489 AC105265.2-201ENST00000467189 838 ntBASIC21.13■□□□□ 0.97
NDUFS3O75489 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.13■□□□□ 0.97
NDUFS3O75489 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NDUFS3O75489 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NDUFS3O75489 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NDUFS3O75489 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NDUFS3O75489 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NDUFS3O75489 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NDUFS3O75489 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.12■□□□□ 0.97
NDUFS3O75489 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NDUFS3O75489 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDUFS3O75489 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.12■□□□□ 0.97
NDUFS3O75489 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDUFS3O75489 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDUFS3O75489 AC012414.1-201ENST00000556676 535 ntBASIC21.12■□□□□ 0.97
NDUFS3O75489 AL354811.1-201ENST00000610286 706 ntBASIC21.12■□□□□ 0.97
NDUFS3O75489 AC026310.3-201ENST00000625186 2373 ntBASIC21.12■□□□□ 0.97
NDUFS3O75489 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDUFS3O75489 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NDUFS3O75489 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDUFS3O75489 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.12■□□□□ 0.97
NDUFS3O75489 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.12■□□□□ 0.97
NDUFS3O75489 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.11■□□□□ 0.97
NDUFS3O75489 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NDUFS3O75489 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.11■□□□□ 0.97
NDUFS3O75489 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NDUFS3O75489 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
NDUFS3O75489 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.11■□□□□ 0.97
NDUFS3O75489 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.11■□□□□ 0.97
NDUFS3O75489 AL358852.1-201ENST00000623174 1268 ntBASIC21.11■□□□□ 0.97
NDUFS3O75489 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NDUFS3O75489 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NDUFS3O75489 AC005224.4-201ENST00000583262 1652 ntBASIC21.11■□□□□ 0.97
NDUFS3O75489 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NDUFS3O75489 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NDUFS3O75489 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NDUFS3O75489 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.1■□□□□ 0.97
NDUFS3O75489 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
NDUFS3O75489 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NDUFS3O75489 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.1■□□□□ 0.97
NDUFS3O75489 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.1■□□□□ 0.97
NDUFS3O75489 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NDUFS3O75489 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NDUFS3O75489 IRS3P-201ENST00000223076 1006 ntBASIC21.1■□□□□ 0.97
NDUFS3O75489 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.1■□□□□ 0.97
NDUFS3O75489 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NDUFS3O75489 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.1■□□□□ 0.97
NDUFS3O75489 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.1■□□□□ 0.97
NDUFS3O75489 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NDUFS3O75489 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.1■□□□□ 0.97
NDUFS3O75489 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NDUFS3O75489 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
NDUFS3O75489 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NDUFS3O75489 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFS3O75489 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFS3O75489 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.09■□□□□ 0.97
NDUFS3O75489 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
NDUFS3O75489 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFS3O75489 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.09■□□□□ 0.97
NDUFS3O75489 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.09■□□□□ 0.97
NDUFS3O75489 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.09■□□□□ 0.97
NDUFS3O75489 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFS3O75489 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFS3O75489 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.09■□□□□ 0.97
NDUFS3O75489 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFS3O75489 AC055733.4-201ENST00000638462 1354 ntBASIC21.09■□□□□ 0.97
NDUFS3O75489 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.09■□□□□ 0.97
NDUFS3O75489 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
NDUFS3O75489 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.08■□□□□ 0.97
NDUFS3O75489 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.08■□□□□ 0.97
NDUFS3O75489 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
NDUFS3O75489 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
NDUFS3O75489 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NDUFS3O75489 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NDUFS3O75489 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
NDUFS3O75489 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.08■□□□□ 0.97
NDUFS3O75489 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.08■□□□□ 0.97
NDUFS3O75489 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.08■□□□□ 0.97
NDUFS3O75489 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.08■□□□□ 0.97
NDUFS3O75489 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NDUFS3O75489 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.08■□□□□ 0.97
NDUFS3O75489 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
NDUFS3O75489 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NDUFS3O75489 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
NDUFS3O75489 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFS3O75489 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFS3O75489 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms