Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUPT3HO75486 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SUPT3HO75486 AL136162.1-201ENST00000607711 1078 ntBASIC20.94■□□□□ 0.94
SUPT3HO75486 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUPT3HO75486 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUPT3HO75486 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUPT3HO75486 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUPT3HO75486 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.94■□□□□ 0.94
SUPT3HO75486 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SUPT3HO75486 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SUPT3HO75486 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.94■□□□□ 0.94
SUPT3HO75486 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SUPT3HO75486 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.93■□□□□ 0.94
SUPT3HO75486 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.93■□□□□ 0.94
SUPT3HO75486 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.93■□□□□ 0.94
SUPT3HO75486 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.93■□□□□ 0.94
SUPT3HO75486 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HO75486 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HO75486 BX842568.3-201ENST00000418104 571 ntBASIC20.93■□□□□ 0.94
SUPT3HO75486 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HO75486 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HO75486 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.93■□□□□ 0.94
SUPT3HO75486 AC024257.2-201ENST00000549699 147 ntBASIC20.93■□□□□ 0.94
SUPT3HO75486 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.93■□□□□ 0.94
SUPT3HO75486 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HO75486 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.93■□□□□ 0.94
SUPT3HO75486 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HO75486 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.93■□□□□ 0.94
SUPT3HO75486 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HO75486 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HO75486 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HO75486 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUPT3HO75486 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SUPT3HO75486 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SUPT3HO75486 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SUPT3HO75486 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SUPT3HO75486 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SUPT3HO75486 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SUPT3HO75486 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SUPT3HO75486 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.92■□□□□ 0.94
SUPT3HO75486 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.92■□□□□ 0.94
SUPT3HO75486 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.92■□□□□ 0.94
SUPT3HO75486 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.92■□□□□ 0.94
SUPT3HO75486 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SUPT3HO75486 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SUPT3HO75486 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SUPT3HO75486 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SUPT3HO75486 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SUPT3HO75486 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SUPT3HO75486 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SUPT3HO75486 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.91■□□□□ 0.94
SUPT3HO75486 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SUPT3HO75486 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SUPT3HO75486 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SUPT3HO75486 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SUPT3HO75486 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.91■□□□□ 0.94
SUPT3HO75486 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SUPT3HO75486 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.9■□□□□ 0.94
SUPT3HO75486 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SUPT3HO75486 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.9■□□□□ 0.94
SUPT3HO75486 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.9■□□□□ 0.94
SUPT3HO75486 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.9■□□□□ 0.94
SUPT3HO75486 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SUPT3HO75486 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.9■□□□□ 0.94
SUPT3HO75486 AC008406.3-201ENST00000620001 1374 ntBASIC20.9■□□□□ 0.94
SUPT3HO75486 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SUPT3HO75486 AC135279.3-201ENST00000610945 1311 ntBASIC20.9■□□□□ 0.94
SUPT3HO75486 AC092667.1-201ENST00000434301 2586 ntBASIC20.9■□□□□ 0.94
SUPT3HO75486 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
SUPT3HO75486 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SUPT3HO75486 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.9■□□□□ 0.94
SUPT3HO75486 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.9■□□□□ 0.94
SUPT3HO75486 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SUPT3HO75486 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SUPT3HO75486 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SUPT3HO75486 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SUPT3HO75486 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SUPT3HO75486 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.89■□□□□ 0.94
SUPT3HO75486 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SUPT3HO75486 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.89■□□□□ 0.93
SUPT3HO75486 AF106564.1-201ENST00000607058 2553 ntBASIC20.89■□□□□ 0.93
SUPT3HO75486 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
SUPT3HO75486 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SUPT3HO75486 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.89■□□□□ 0.93
SUPT3HO75486 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SUPT3HO75486 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SUPT3HO75486 AC126544.1-201ENST00000580842 1059 ntBASIC20.89■□□□□ 0.93
SUPT3HO75486 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.89■□□□□ 0.93
SUPT3HO75486 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SUPT3HO75486 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.89■□□□□ 0.93
SUPT3HO75486 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SUPT3HO75486 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SUPT3HO75486 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SUPT3HO75486 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SUPT3HO75486 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.88■□□□□ 0.93
SUPT3HO75486 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SUPT3HO75486 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SUPT3HO75486 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SUPT3HO75486 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SUPT3HO75486 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms