Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF254O75437 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF254O75437 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF254O75437 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF254O75437 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF254O75437 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF254O75437 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF254O75437 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF254O75437 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
ZNF254O75437 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ZNF254O75437 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF254O75437 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF254O75437 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF254O75437 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF254O75437 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF254O75437 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF254O75437 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF254O75437 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF254O75437 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.72■□□□□ 0.59
ZNF254O75437 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNF254O75437 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF254O75437 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF254O75437 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF254O75437 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNF254O75437 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
ZNF254O75437 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF254O75437 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF254O75437 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNF254O75437 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNF254O75437 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF254O75437 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF254O75437 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.71■□□□□ 0.59
ZNF254O75437 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF254O75437 AL158211.5-201ENST00000623583 2518 ntBASIC18.71■□□□□ 0.59
ZNF254O75437 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF254O75437 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF254O75437 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.71■□□□□ 0.59
ZNF254O75437 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ZNF254O75437 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF254O75437 AP004607.7-201ENST00000527152 1677 ntBASIC18.71■□□□□ 0.59
ZNF254O75437 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ZNF254O75437 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF254O75437 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF254O75437 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ZNF254O75437 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.71■□□□□ 0.59
ZNF254O75437 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF254O75437 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ZNF254O75437 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF254O75437 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.71■□□□□ 0.59
ZNF254O75437 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.71■□□□□ 0.59
ZNF254O75437 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ZNF254O75437 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
ZNF254O75437 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
ZNF254O75437 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF254O75437 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF254O75437 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
ZNF254O75437 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
ZNF254O75437 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF254O75437 AC073130.3-201ENST00000624389 2278 ntBASIC18.7■□□□□ 0.58
ZNF254O75437 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF254O75437 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF254O75437 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF254O75437 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF254O75437 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF254O75437 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
ZNF254O75437 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF254O75437 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ZNF254O75437 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF254O75437 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.7■□□□□ 0.58
ZNF254O75437 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.7■□□□□ 0.58
ZNF254O75437 MIR4466-201ENST00000606121 54 ntBASIC18.7■□□□□ 0.58
ZNF254O75437 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF254O75437 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF254O75437 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF254O75437 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF254O75437 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF254O75437 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ZNF254O75437 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF254O75437 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF254O75437 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF254O75437 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF254O75437 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF254O75437 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.69■□□□□ 0.58
ZNF254O75437 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF254O75437 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.69■□□□□ 0.58
ZNF254O75437 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF254O75437 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.69■□□□□ 0.58
ZNF254O75437 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF254O75437 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF254O75437 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF254O75437 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF254O75437 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ZNF254O75437 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF254O75437 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF254O75437 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
ZNF254O75437 SLC47A1P1-202ENST00000449666 945 ntBASIC18.68■□□□□ 0.58
ZNF254O75437 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF254O75437 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF254O75437 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF254O75437 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms