Protein–RNA interactions for Protein: O75339

CILP, Cartilage intermediate layer protein 1, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CILPO75339 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CILPO75339 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CILPO75339 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.6■■□□□ 1.21
CILPO75339 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.6■■□□□ 1.21
CILPO75339 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.6■■□□□ 1.21
CILPO75339 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CILPO75339 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.6■■□□□ 1.21
CILPO75339 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CILPO75339 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CILPO75339 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CILPO75339 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
CILPO75339 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CILPO75339 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.59■■□□□ 1.21
CILPO75339 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.59■■□□□ 1.21
CILPO75339 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.59■■□□□ 1.21
CILPO75339 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.59■■□□□ 1.21
CILPO75339 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.59■■□□□ 1.21
CILPO75339 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
CILPO75339 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CILPO75339 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CILPO75339 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
CILPO75339 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CILPO75339 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
CILPO75339 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CILPO75339 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CILPO75339 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.58■■□□□ 1.21
CILPO75339 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CILPO75339 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.21
CILPO75339 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CILPO75339 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.58■■□□□ 1.21
CILPO75339 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.58■■□□□ 1.21
CILPO75339 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.58■■□□□ 1.21
CILPO75339 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.58■■□□□ 1.2
CILPO75339 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.57■■□□□ 1.2
CILPO75339 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CILPO75339 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CILPO75339 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CILPO75339 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CILPO75339 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.57■■□□□ 1.2
CILPO75339 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CILPO75339 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
CILPO75339 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.57■■□□□ 1.2
CILPO75339 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.57■■□□□ 1.2
CILPO75339 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.57■■□□□ 1.2
CILPO75339 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.57■■□□□ 1.2
CILPO75339 AC104187.1-201ENST00000607510 612 ntBASIC22.57■■□□□ 1.2
CILPO75339 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.57■■□□□ 1.2
CILPO75339 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.57■■□□□ 1.2
CILPO75339 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CILPO75339 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CILPO75339 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CILPO75339 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.56■■□□□ 1.2
CILPO75339 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CILPO75339 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CILPO75339 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CILPO75339 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CILPO75339 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CILPO75339 AC244015.2-201ENST00000616358 1861 ntBASIC22.56■■□□□ 1.2
CILPO75339 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CILPO75339 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CILPO75339 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CILPO75339 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CILPO75339 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.56■■□□□ 1.2
CILPO75339 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CILPO75339 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.56■■□□□ 1.2
CILPO75339 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.56■■□□□ 1.2
CILPO75339 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CILPO75339 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CILPO75339 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CILPO75339 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CILPO75339 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CILPO75339 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CILPO75339 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.56■■□□□ 1.2
CILPO75339 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CILPO75339 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CILPO75339 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.56■■□□□ 1.2
CILPO75339 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.56■■□□□ 1.2
CILPO75339 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CILPO75339 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CILPO75339 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.55■■□□□ 1.2
CILPO75339 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CILPO75339 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CILPO75339 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CILPO75339 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CILPO75339 AC138907.5-202ENST00000569484 235 ntBASIC22.55■■□□□ 1.2
CILPO75339 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CILPO75339 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CILPO75339 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CILPO75339 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CILPO75339 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.55■■□□□ 1.2
CILPO75339 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CILPO75339 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CILPO75339 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CILPO75339 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CILPO75339 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
CILPO75339 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
CILPO75339 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.54■■□□□ 1.2
CILPO75339 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.54■■□□□ 1.2
CILPO75339 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CILPO75339 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms