Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.91■■□□□ 1.58
CTNND1O60716 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CTNND1O60716 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CTNND1O60716 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
CTNND1O60716 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CTNND1O60716 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
CTNND1O60716 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
CTNND1O60716 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CTNND1O60716 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
CTNND1O60716 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.91■■□□□ 1.58
CTNND1O60716 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC24.91■■□□□ 1.58
CTNND1O60716 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC24.91■■□□□ 1.58
CTNND1O60716 KRT16P2-201ENST00000414673 1423 ntBASIC24.91■■□□□ 1.58
CTNND1O60716 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC24.91■■□□□ 1.58
CTNND1O60716 AC139530.1-201ENST00000575312 1977 ntBASIC24.91■■□□□ 1.58
CTNND1O60716 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CTNND1O60716 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CTNND1O60716 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC24.9■■□□□ 1.58
CTNND1O60716 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CTNND1O60716 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
CTNND1O60716 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CTNND1O60716 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC24.9■■□□□ 1.58
CTNND1O60716 AL162412.1-201ENST00000567129 965 ntBASIC24.9■■□□□ 1.58
CTNND1O60716 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.9■■□□□ 1.58
CTNND1O60716 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
CTNND1O60716 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.9■■□□□ 1.58
CTNND1O60716 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CTNND1O60716 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CTNND1O60716 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.89■■□□□ 1.58
CTNND1O60716 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CTNND1O60716 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CTNND1O60716 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CTNND1O60716 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC24.89■■□□□ 1.58
CTNND1O60716 POU5F1P3-201ENST00000428824 1078 ntBASIC24.89■■□□□ 1.58
CTNND1O60716 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CTNND1O60716 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC24.89■■□□□ 1.58
CTNND1O60716 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.89■■□□□ 1.58
CTNND1O60716 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC24.89■■□□□ 1.58
CTNND1O60716 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
CTNND1O60716 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC24.89■■□□□ 1.57
CTNND1O60716 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.89■■□□□ 1.57
CTNND1O60716 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
CTNND1O60716 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CTNND1O60716 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC24.88■■□□□ 1.57
CTNND1O60716 RNA5SP413-201ENST00000516373 109 ntBASIC24.88■■□□□ 1.57
CTNND1O60716 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CTNND1O60716 RBM17P2-201ENST00000616397 1405 ntBASIC24.87■■□□□ 1.57
CTNND1O60716 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.87■■□□□ 1.57
CTNND1O60716 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CTNND1O60716 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CTNND1O60716 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CTNND1O60716 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CTNND1O60716 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC24.87■■□□□ 1.57
CTNND1O60716 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC24.87■■□□□ 1.57
CTNND1O60716 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.87■■□□□ 1.57
CTNND1O60716 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CTNND1O60716 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CTNND1O60716 AL591742.1-201ENST00000604433 565 ntBASIC24.87■■□□□ 1.57
CTNND1O60716 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CTNND1O60716 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CTNND1O60716 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CTNND1O60716 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CTNND1O60716 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CTNND1O60716 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CTNND1O60716 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.86■■□□□ 1.57
CTNND1O60716 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC24.86■■□□□ 1.57
CTNND1O60716 BX276092.2-201ENST00000417668 665 ntBASIC24.86■■□□□ 1.57
CTNND1O60716 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC24.86■■□□□ 1.57
CTNND1O60716 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
CTNND1O60716 AC243732.1-201ENST00000612648 864 ntBASIC24.86■■□□□ 1.57
CTNND1O60716 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.86■■□□□ 1.57
CTNND1O60716 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC24.86■■□□□ 1.57
CTNND1O60716 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CTNND1O60716 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CTNND1O60716 RARG-204ENST00000543726 1779 ntTSL 2 BASIC24.85■■□□□ 1.57
CTNND1O60716 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.85■■□□□ 1.57
CTNND1O60716 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CTNND1O60716 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
CTNND1O60716 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
CTNND1O60716 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CTNND1O60716 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC24.85■■□□□ 1.57
CTNND1O60716 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC24.85■■□□□ 1.57
CTNND1O60716 ITM2C-210ENST00000620962 501 ntBASIC24.85■■□□□ 1.57
CTNND1O60716 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CTNND1O60716 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC24.85■■□□□ 1.57
CTNND1O60716 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CTNND1O60716 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC24.85■■□□□ 1.57
CTNND1O60716 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CTNND1O60716 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC24.85■■□□□ 1.57
CTNND1O60716 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
CTNND1O60716 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CTNND1O60716 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
CTNND1O60716 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.84■■□□□ 1.57
CTNND1O60716 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
CTNND1O60716 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC24.84■■□□□ 1.57
CTNND1O60716 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CTNND1O60716 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC24.84■■□□□ 1.57
CTNND1O60716 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CTNND1O60716 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CTNND1O60716 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms