Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL41O60662 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL41O60662 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL41O60662 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL41O60662 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL41O60662 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL41O60662 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
KLHL41O60662 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL41O60662 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KLHL41O60662 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KLHL41O60662 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KLHL41O60662 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KLHL41O60662 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.95■□□□□ 0.94
KLHL41O60662 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.95■□□□□ 0.94
KLHL41O60662 AC008764.7-201ENST00000593779 1081 ntBASIC20.95■□□□□ 0.94
KLHL41O60662 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KLHL41O60662 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KLHL41O60662 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.95■□□□□ 0.94
KLHL41O60662 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KLHL41O60662 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
KLHL41O60662 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KLHL41O60662 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
KLHL41O60662 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
KLHL41O60662 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.94■□□□□ 0.94
KLHL41O60662 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.94■□□□□ 0.94
KLHL41O60662 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.94■□□□□ 0.94
KLHL41O60662 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
KLHL41O60662 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KLHL41O60662 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.94■□□□□ 0.94
KLHL41O60662 BX842568.3-201ENST00000418104 571 ntBASIC20.94■□□□□ 0.94
KLHL41O60662 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.94■□□□□ 0.94
KLHL41O60662 AC097381.1-201ENST00000429019 1296 ntBASIC20.94■□□□□ 0.94
KLHL41O60662 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KLHL41O60662 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KLHL41O60662 AC233992.3-201ENST00000607491 485 ntBASIC20.94■□□□□ 0.94
KLHL41O60662 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
KLHL41O60662 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.94■□□□□ 0.94
KLHL41O60662 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KLHL41O60662 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KLHL41O60662 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
KLHL41O60662 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KLHL41O60662 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.93■□□□□ 0.94
KLHL41O60662 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KLHL41O60662 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.93■□□□□ 0.94
KLHL41O60662 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
KLHL41O60662 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
KLHL41O60662 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
KLHL41O60662 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.93■□□□□ 0.94
KLHL41O60662 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KLHL41O60662 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KLHL41O60662 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KLHL41O60662 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KLHL41O60662 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KLHL41O60662 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.93■□□□□ 0.94
KLHL41O60662 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.93■□□□□ 0.94
KLHL41O60662 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KLHL41O60662 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KLHL41O60662 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
KLHL41O60662 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.93■□□□□ 0.94
KLHL41O60662 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KLHL41O60662 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KLHL41O60662 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KLHL41O60662 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
KLHL41O60662 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KLHL41O60662 AC099791.1-201ENST00000416440 715 ntBASIC20.92■□□□□ 0.94
KLHL41O60662 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.92■□□□□ 0.94
KLHL41O60662 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KLHL41O60662 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.92■□□□□ 0.94
KLHL41O60662 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.92■□□□□ 0.94
KLHL41O60662 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KLHL41O60662 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
KLHL41O60662 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
KLHL41O60662 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KLHL41O60662 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KLHL41O60662 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KLHL41O60662 AC026471.6-201ENST00000622954 1905 ntBASIC20.92■□□□□ 0.94
KLHL41O60662 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KLHL41O60662 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KLHL41O60662 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.92■□□□□ 0.94
KLHL41O60662 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KLHL41O60662 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
KLHL41O60662 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.91■□□□□ 0.94
KLHL41O60662 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KLHL41O60662 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KLHL41O60662 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KLHL41O60662 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
KLHL41O60662 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
KLHL41O60662 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
KLHL41O60662 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.91■□□□□ 0.94
KLHL41O60662 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KLHL41O60662 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KLHL41O60662 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KLHL41O60662 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
KLHL41O60662 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
KLHL41O60662 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KLHL41O60662 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KLHL41O60662 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
KLHL41O60662 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KLHL41O60662 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KLHL41O60662 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms