Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6DO43924 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PDE6DO43924 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.43■□□□□ 0.22
PDE6DO43924 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6DO43924 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6DO43924 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
PDE6DO43924 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6DO43924 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6DO43924 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.43■□□□□ 0.22
PDE6DO43924 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6DO43924 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6DO43924 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.43■□□□□ 0.22
PDE6DO43924 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6DO43924 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PDE6DO43924 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6DO43924 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PDE6DO43924 DUX4L9-201ENST00000449051 1259 ntBASIC16.42■□□□□ 0.22
PDE6DO43924 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6DO43924 AC019171.1-201ENST00000601251 1056 ntBASIC16.42■□□□□ 0.22
PDE6DO43924 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.42■□□□□ 0.22
PDE6DO43924 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.42■□□□□ 0.22
PDE6DO43924 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6DO43924 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PDE6DO43924 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PDE6DO43924 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6DO43924 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6DO43924 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6DO43924 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.42■□□□□ 0.22
PDE6DO43924 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDE6DO43924 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.41■□□□□ 0.22
PDE6DO43924 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.41■□□□□ 0.22
PDE6DO43924 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6DO43924 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6DO43924 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PDE6DO43924 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PDE6DO43924 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6DO43924 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6DO43924 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6DO43924 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.41■□□□□ 0.22
PDE6DO43924 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
PDE6DO43924 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.41■□□□□ 0.22
PDE6DO43924 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6DO43924 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6DO43924 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.41■□□□□ 0.22
PDE6DO43924 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.41■□□□□ 0.22
PDE6DO43924 AC120024.1-201ENST00000562672 995 ntBASIC16.41■□□□□ 0.22
PDE6DO43924 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6DO43924 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6DO43924 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6DO43924 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6DO43924 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6DO43924 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6DO43924 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.41■□□□□ 0.22
PDE6DO43924 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.41■□□□□ 0.22
PDE6DO43924 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6DO43924 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6DO43924 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6DO43924 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PDE6DO43924 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
PDE6DO43924 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PDE6DO43924 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.4■□□□□ 0.22
PDE6DO43924 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6DO43924 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6DO43924 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6DO43924 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6DO43924 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6DO43924 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PDE6DO43924 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6DO43924 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6DO43924 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.4■□□□□ 0.22
PDE6DO43924 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PDE6DO43924 AC026471.6-201ENST00000622954 1905 ntBASIC16.4■□□□□ 0.22
PDE6DO43924 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6DO43924 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PDE6DO43924 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.4■□□□□ 0.22
PDE6DO43924 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6DO43924 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6DO43924 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6DO43924 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6DO43924 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6DO43924 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.4■□□□□ 0.22
PDE6DO43924 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PDE6DO43924 AC073314.1-201ENST00000568729 2216 ntBASIC16.39■□□□□ 0.22
PDE6DO43924 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6DO43924 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.39■□□□□ 0.21
PDE6DO43924 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6DO43924 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PDE6DO43924 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6DO43924 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.39■□□□□ 0.21
PDE6DO43924 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6DO43924 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.39■□□□□ 0.21
PDE6DO43924 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6DO43924 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
PDE6DO43924 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
PDE6DO43924 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6DO43924 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6DO43924 AFG3L1P-217ENST00000557444 2447 ntBASIC16.39■□□□□ 0.21
PDE6DO43924 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6DO43924 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6DO43924 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms