Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ARHGEF9O43307 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ARHGEF9O43307 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ARHGEF9O43307 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ARHGEF9O43307 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ARHGEF9O43307 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.53■□□□□ 0.72
ARHGEF9O43307 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.53■□□□□ 0.72
ARHGEF9O43307 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ARHGEF9O43307 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ARHGEF9O43307 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
ARHGEF9O43307 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.53■□□□□ 0.72
ARHGEF9O43307 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.53■□□□□ 0.72
ARHGEF9O43307 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ARHGEF9O43307 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF9O43307 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF9O43307 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF9O43307 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF9O43307 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF9O43307 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.52■□□□□ 0.72
ARHGEF9O43307 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF9O43307 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF9O43307 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ARHGEF9O43307 AC073130.3-201ENST00000624389 2278 ntBASIC19.52■□□□□ 0.72
ARHGEF9O43307 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF9O43307 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ARHGEF9O43307 MIR4767-201ENST00000582827 78 ntBASIC19.52■□□□□ 0.72
ARHGEF9O43307 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.52■□□□□ 0.72
ARHGEF9O43307 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
ARHGEF9O43307 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF9O43307 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF9O43307 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
ARHGEF9O43307 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ARHGEF9O43307 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.51■□□□□ 0.71
ARHGEF9O43307 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.51■□□□□ 0.71
ARHGEF9O43307 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF9O43307 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF9O43307 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
ARHGEF9O43307 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ARHGEF9O43307 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ARHGEF9O43307 IRS3P-201ENST00000223076 1006 ntBASIC19.51■□□□□ 0.71
ARHGEF9O43307 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF9O43307 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF9O43307 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.51■□□□□ 0.71
ARHGEF9O43307 AC087623.3-201ENST00000607047 1098 ntBASIC19.51■□□□□ 0.71
ARHGEF9O43307 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
ARHGEF9O43307 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF9O43307 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF9O43307 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.51■□□□□ 0.71
ARHGEF9O43307 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF9O43307 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
ARHGEF9O43307 AC133637.1-201ENST00000624115 1537 ntBASIC19.51■□□□□ 0.71
ARHGEF9O43307 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.5■□□□□ 0.71
ARHGEF9O43307 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF9O43307 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF9O43307 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ARHGEF9O43307 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF9O43307 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.5■□□□□ 0.71
ARHGEF9O43307 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.5■□□□□ 0.71
ARHGEF9O43307 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF9O43307 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.5■□□□□ 0.71
ARHGEF9O43307 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.5■□□□□ 0.71
ARHGEF9O43307 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF9O43307 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF9O43307 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.5■□□□□ 0.71
ARHGEF9O43307 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF9O43307 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF9O43307 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.5■□□□□ 0.71
ARHGEF9O43307 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.5■□□□□ 0.71
ARHGEF9O43307 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF9O43307 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF9O43307 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
ARHGEF9O43307 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF9O43307 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.49■□□□□ 0.71
ARHGEF9O43307 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF9O43307 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF9O43307 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF9O43307 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.49■□□□□ 0.71
ARHGEF9O43307 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ARHGEF9O43307 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.49■□□□□ 0.71
ARHGEF9O43307 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF9O43307 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF9O43307 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF9O43307 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF9O43307 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF9O43307 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF9O43307 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ARHGEF9O43307 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF9O43307 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF9O43307 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF9O43307 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.48■□□□□ 0.71
ARHGEF9O43307 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF9O43307 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF9O43307 AL138724.1-201ENST00000606771 1088 ntBASIC19.48■□□□□ 0.71
ARHGEF9O43307 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF9O43307 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ARHGEF9O43307 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF9O43307 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ARHGEF9O43307 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF9O43307 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.48■□□□□ 0.71
ARHGEF9O43307 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms